Predicted Glycosyltransferases

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   PRO-195  5.2 5.5 16.8 -21.0 115.8 116.5 -0.8
 PRO-195   GLY-196  2.8 3.0 28.3 -51.5 145.6 146.1 12.5
 GLY-196   ALA-197  1.0 0.8 22.9 -102.6 141.8 139.1 77.8
 ALA-197   ASP-198  1.8 1.3 14.8 -13.3 103.1 113.7 8.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-385   ALA-386  9.1 9.4 2.4 -5.0 128.1 126.1 5.9
 ALA-386   ARG-387  5.5 5.7 29.5 -11.0 118.2 114.2 -2.1
 ARG-387   THR-388  6.3 6.5 11.8 27.2 136.2 154.2 -32.2
 THR-388   PHE-389  9.0 8.0 35.5 -13.7 139.0 128.0 -27.5
 PHE-389   SER-390  7.9 4.4 138.2 -88.5 112.7 87.8 294.6
 SER-390   TRP-391  4.4 4.3 128.3 35.8 161.0 144.5 -159.2
 TRP-391   ALA-392  3.7 3.5 -23.7 -17.4 52.3 53.1 30.2
 ALA-392   ALA-393  7.1 6.8 6.5 40.3 126.0 123.3 -29.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees