D-Lactate Dehydrogenase (Fermentative)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-95
HIS-96
14.6
14.8
-6.8
3.5
24.8
28.2
20.2
HIS-96
VAL-97
13.0
13.1
2.0
-32.6
87.9
88.0
-24.0
VAL-97
PRO-98
10.9
11.0
-35.4
-2.9
74.6
52.4
106.5
PRO-98
ALA-99
13.8
14.0
15.1
7.8
149.7
119.6
-67.9
ALA-99
TYR-100
13.1
12.8
-99.2
33.5
72.6
91.9
59.0
TYR-100
SER-101
10.3
9.3
162.1
-126.8
91.3
128.5
-15.2
SER-101
PRO-102
10.2
10.6
-36.6
15.3
42.2
42.8
68.9
PRO-102
HIS-103
13.5
13.6
6.5
-2.6
131.6
141.9
-16.0
HIS-103
ALA-104
13.0
13.3
6.7
-1.5
130.9
128.2
-32.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-303
LEU-304
5.3
5.4
-7.6
0.7
70.2
61.8
26.6
LEU-304
ALA-305
1.6
1.8
-3.2
-3.1
17.2
19.1
28.4
ALA-305
ALA-306
2.3
2.6
0.1
-7.6
125.2
126.6
20.6
ALA-306
ILE-307
4.7
4.9
6.9
-0.7
97.9
98.0
22.7
ILE-307
ALA-308
4.7
4.9
-2.3
0.5
48.6
44.4
-12.3
ALA-308
ASP-309
2.5
2.6
-2.7
-2.2
18.3
22.8
29.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees