Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
7.4
7.9
-21.4
4.1
55.5
52.8
51.8
GLN-144
GLY-145
3.8
4.3
15.4
2.5
52.2
55.8
49.2
GLY-145
LEU-146
0.9
0.7
11.4
-20.7
122.3
119.1
15.3
LEU-146
THR-147
3.4
2.9
-2.4
-2.9
55.0
57.8
-0.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-239
THR-240
6.9
6.9
5.6
-16.3
168.7
166.3
31.2
THR-240
THR-241
6.5
6.6
7.3
68.1
105.9
110.9
-99.6
THR-241
GLY-242
9.6
9.4
-137.7
-0.2
5.5
67.8
466.8
GLY-242
GLU-243
10.9
8.7
71.0
13.4
121.3
150.1
-270.1
GLU-243
LEU-244
9.9
8.7
-3.2
-6.9
73.6
61.2
-16.5
LEU-244
PHE-245
6.3
5.6
-9.8
43.8
19.8
32.6
-144.0
PHE-245
PHE-246
5.7
6.7
-168.4
147.6
72.3
38.3
65.2
PHE-246
ARG-247
3.1
3.5
88.3
-47.3
67.1
70.9
65.7
ARG-247
SER-248
2.4
2.1
-10.4
1.1
61.0
66.1
20.0
SER-248
GLY-249
3.6
3.3
-30.7
23.6
123.6
123.3
-19.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees