425Aa Long Hypothetical Proton Glutamate Symport Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-69   ALA-70  26.6 25.1 -12.0 26.6 141.8 141.4 42.1
 ALA-70   ALA-71  26.3 25.1 -86.9 44.3 149.3 151.9 -107.0
 ALA-71   SER-72  26.7 26.5 -107.2 84.1 87.4 99.1 -39.3
 SER-72   ILE-73  22.9 23.8 -109.8 -123.0 119.7 97.9 179.8
 ILE-73   SER-74  20.4 21.1 -87.0 -22.1 70.9 131.4 -73.2
 SER-74   PRO-75  21.9 23.0 169.9 -6.1 103.1 38.3 -68.0
 PRO-75   ALA-76  19.3 20.5 177.0 -48.7 112.9 42.7 -17.6
 ALA-76   ARG-77  15.8 20.7 172.5 -84.9 150.9 92.0 -85.1
 ARG-77   LEU-78  17.0 22.4 101.6 -96.7 131.3 108.6 3.9
 LEU-78   GLY-79  19.2 19.7 -176.2 9.7 85.5 130.2 169.2
 GLY-79   ARG-80  17.9 17.7 -138.8 -10.6 65.4 70.5 153.3
 ARG-80   VAL-81  14.2 14.0 42.5 -23.4 154.0 123.1 -58.6
 VAL-81   GLY-82  15.1 14.1 28.1 -36.4 132.1 159.4 16.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-123   PRO-124  32.4 30.5 9.5 -10.4 139.2 149.6 -2.8
 PRO-124   HIS-125  31.8 30.9 9.7 -23.4 139.1 108.5 20.0
 HIS-125   GLN-126  34.1 34.1 -0.3 5.3 46.8 47.1 -4.6
 GLN-126   ALA-127  32.9 34.3 -10.4 -14.0 35.3 21.5 58.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-220   GLY-221  20.7 20.0 5.6 132.6 101.6 119.4 301.1
 GLY-221   VAL-222  18.4 18.3 -82.1 -33.4 24.6 124.1 -373.2
 VAL-222   HIS-223  18.2 15.5 -43.2 91.9 81.9 133.1 1.3
 HIS-223   VAL-224  17.4 13.8 -31.8 17.6 123.8 163.2 -27.1
 VAL-224   VAL-225  14.3 15.7 -31.3 19.3 61.4 113.4 -7.2
 VAL-225   GLY-226  11.9 14.1 146.5 -146.2 89.4 64.2 30.6
 GLY-226   GLU-227  11.1 10.7 105.1 -3.3 35.5 25.2 230.3
 GLU-227   LEU-228  11.4 12.4 -18.7 11.6 149.6 133.9 -10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees