Endo-1,4-Beta-Xylanase A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-69   GLY-70  10.9 10.9 -0.4 2.5 55.1 56.6 68.9
 GLY-70   TRP-71  8.2 8.1 5.5 -4.6 132.2 131.6 -78.4
 TRP-71   THR-72  6.0 6.0 0.1 0.8 91.3 93.0 7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-78   TYR-79  9.0 9.1 -3.8 3.3 18.1 15.8 -5.3
 TYR-79   TYR-80  8.9 8.8 -8.6 7.4 54.2 55.5 158.6
 TYR-80   VAL-81  10.8 10.9 -0.6 -0.7 20.4 19.9 -33.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-108   THR-109  15.9 15.9 3.4 -10.6 148.3 148.9 100.2
 THR-109   THR-110  15.3 15.4 -0.8 -4.2 55.6 51.2 -6.0
 THR-110   THR-111  16.8 16.8 -7.8 4.2 26.9 27.6 91.0
 THR-111   ARG-112  16.3 16.4 5.3 -8.4 121.0 121.6 -54.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-122   THR-123  15.2 15.1 -1.1 0.7 79.6 78.9 -128.3
 THR-123   THR-124  12.6 12.6 1.0 -8.0 135.4 132.7 405.2
 THR-124   PHE-125  13.0 12.9 0.1 -5.7 132.9 133.3 -184.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-159   LEU-160  8.5 8.7 5.6 -5.2 124.3 125.4 -60.0
 LEU-160   GLY-161  5.0 5.2 -0.3 3.3 39.6 39.1 -52.0
 GLY-161   SER-162  3.7 3.9 -1.6 6.2 104.7 105.5 136.5
 SER-162   ASN-163  4.3 4.3 -6.8 4.1 67.4 69.7 -186.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees