Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-87   GLU-88  6.0 5.8 -11.7 50.6 151.5 152.6 165.3
 GLU-88   ILE-89  5.7 6.3 -14.1 -2.1 89.0 81.9 5.8
 ILE-89   ARG-90  5.7 5.5 -0.4 -8.8 140.5 140.5 -54.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-130   LEU-131  9.4 9.2 -56.4 12.1 27.7 28.1 182.6
 LEU-131   SER-132  9.5 9.2 -6.2 10.6 82.1 80.6 -22.8
 SER-132   LYS-133  13.0 13.0 6.3 -2.0 70.5 65.1 30.3
 LYS-133   VAL-134  12.5 12.6 -38.8 13.8 110.0 108.3 -9.9
 LYS-133   VAL-134  12.5 12.6 -38.8 13.8 110.0 108.3 -9.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-133   VAL-134  12.5 12.6 -38.8 13.8 110.0 108.3 -9.9
 LYS-133   VAL-134  12.5 12.6 -38.8 13.8 110.0 108.3 -9.9
 VAL-134   VAL-135  10.0 10.5 10.9 14.0 24.1 20.9 125.0
 VAL-135   ARG-136  11.6 11.3 -25.1 10.5 94.6 98.5 -6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-175   GLY-176  10.1 10.2 26.0 -5.4 53.0 61.0 40.0
 GLY-176   VAL-177  7.0 6.8 -4.5 7.6 80.0 77.5 4.5
 VAL-177   ASN-178  4.4 4.6 3.4 -3.1 65.4 67.7 5.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-182   ASP-183  7.4 8.4 146.3 -144.1 168.5 126.6 -28.2
 ASP-183   VAL-184  6.4 7.2 66.0 -29.6 111.3 115.6 -75.9
 VAL-184   ASP-185  3.0 3.7 30.7 -56.1 154.9 160.4 129.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-186   PRO-187  1.8 1.5 9.2 -1.2 59.3 72.9 28.6
 PRO-187   ALA-188  4.5 4.5 -4.7 -10.9 62.5 45.8 31.8
 ALA-188   VAL-189  7.9 7.6 34.6 -3.4 102.0 81.0 46.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees