Thermolysin (E.C.3.4.24.27)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-33   THR-34  12.7 12.9 4.1 -16.2 53.5 52.8 -221.1
 THR-34   ARG-35  10.7 10.8 11.1 -23.5 82.7 80.1 211.4
 ARG-35   GLY-36  7.5 7.4 30.2 -1.9 63.3 75.0 198.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-38   ILE-39  10.4 10.6 0.9 13.4 31.0 33.4 147.0
 ILE-39   PHE-40  9.6 9.4 -6.6 10.9 130.0 127.2 -154.4
 PHE-40   THR-41  12.1 12.1 -0.2 2.1 154.4 160.1 132.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-75   TYR-76  6.9 7.2 0.4 -8.0 74.7 76.1 -115.8
 TYR-76   ALA-77  3.5 3.7 15.2 -13.5 40.5 46.2 -45.8
 ALA-77   GLY-78  3.1 3.1 5.8 8.5 30.6 30.4 268.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-96   ASN-97  7.9 8.1 -2.6 2.2 115.1 118.2 -125.1
 ASN-97   ALA-98  6.6 7.0 11.8 -9.7 55.9 52.5 112.7
 ALA-98   ALA-99  9.6 9.8 -19.7 31.9 133.3 137.7 379.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-115   ASN-116  11.0 11.4 -2.6 2.3 87.4 86.0 235.3
 ASN-116   GLY-117  14.6 15.0 -4.3 -0.3 148.2 149.8 -142.7
 GLY-117   SER-118  15.2 15.7 19.1 -18.7 55.1 56.7 16.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-123   ASP-124  8.5 8.3 -9.0 14.1 107.8 111.0 10.5
 ASP-124   GLY-125  6.7 6.7 0.6 -7.8 48.2 49.0 -75.8
 GLY-125   ASP-126  5.2 5.3 -4.1 7.4 153.7 155.5 51.4
 ASP-126   GLY-127  5.6 5.7 19.0 -17.6 64.1 63.3 130.2
 GLY-127   GLN-128  2.5 2.6 -14.3 10.0 55.8 59.7 34.5
 GLY-127   GLN-128  2.5 2.6 -14.3 10.0 55.8 59.7 34.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-127   GLN-128  2.5 2.6 -14.3 10.0 55.8 59.7 34.5
 GLY-127   GLN-128  2.5 2.6 -14.3 10.0 55.8 59.7 34.5
 GLN-128   THR-129  2.0 2.0 -2.9 0.1 125.5 127.8 -118.4
 THR-129   PHE-130  4.7 4.8 -2.6 6.4 151.8 152.2 109.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-132   LEU-133  3.8 3.7 -4.5 5.9 46.6 45.9 18.2
 LEU-133   SER-134  2.5 2.3 -1.0 -2.5 30.0 27.0 75.8
 SER-134   GLY-135  2.5 2.5 4.8 -13.7 86.1 87.1 48.9
 GLY-135   GLY-136  2.8 3.1 21.0 -11.3 114.3 107.5 -53.8
 GLY-136   ILE-137  2.8 3.1 8.3 -11.4 169.6 170.7 -6.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-178   TYR-179  12.3 12.4 2.3 -6.0 133.3 137.9 91.8
 TYR-179   ALA-180  10.4 10.8 8.3 -18.1 68.4 71.2 28.3
 ALA-180   ASN-181  9.9 10.2 17.0 -15.1 73.4 57.7 40.7
 ASN-181   LYS-182  13.3 13.4 6.7 33.1 32.3 27.5 1094.8
 LYS-182   ASN-183  12.8 11.8 -44.6 7.6 126.8 135.2 -840.1
 ASN-183   PRO-184  13.2 13.9 18.7 -3.0 105.9 101.4 -334.4
 PRO-184   ASP-185  12.9 13.7 -19.0 22.9 125.7 121.6 -11.0
 ASP-185   TRP-186  14.5 14.9 2.1 -4.3 106.2 107.9 85.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees