Hiv-1 Hxbc2 Gp120 Core
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-106
ASP-107
10.9
11.1
-13.7
52.7
12.7
7.2
-21.8
ASP-107
ILE-108
11.8
11.1
-30.3
32.5
43.2
58.5
-1.6
ILE-108
CYS-109
8.9
7.5
-175.6
67.9
62.4
83.2
24.0
CYS-109
SER-110
7.0
9.2
163.4
7.6
126.7
139.3
113.0
SER-110
LEU-111
4.1
12.0
166.0
79.8
160.3
152.1
-160.8
LEU-111
TRP-112
5.2
9.5
-172.3
47.5
58.2
73.2
46.2
TRP-112
ASP-113
3.6
8.8
164.2
73.7
150.3
108.2
63.4
ASP-113
GLN-114
5.5
12.6
158.1
26.1
125.5
154.1
-119.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-210
GLU-211
3.9
4.1
-39.3
-31.9
29.5
84.1
25.1
GLU-211
PRO-212
6.0
1.9
11.2
11.3
124.6
122.8
-12.2
PRO-212
ILE-213
5.3
4.6
-26.3
-12.2
91.9
118.8
-8.8
ILE-213
PRO-214
8.1
7.8
5.1
-2.8
162.6
122.7
-1.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees