Phosphoglycerate Kinase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PHE-196   ALA-197  3.1 3.6 -0.4 14.4 157.3 154.0 36.7
 ALA-197   LYS-198  4.6 5.4 -3.6 -3.0 89.1 84.2 -16.9
 LYS-198   ALA-199  7.9 8.5 -8.2 0.4 76.4 76.1 13.0
 ALA-199   LEU-200  7.4 7.6 8.8 -20.8 40.6 45.6 0.0
 LEU-200   GLU-201  6.3 6.4 37.0 14.4 35.1 30.7 174.2
 GLU-201   SER-202  7.7 8.4 -9.7 -3.2 83.4 99.7 14.0
 SER-202   PRO-203  11.1 11.6 11.3 7.7 160.6 154.6 -79.4
 PRO-203   GLU-204  11.7 11.5 5.2 0.6 101.3 102.3 -45.1
 GLU-204   ARG-205  14.8 14.6 3.6 -3.6 93.0 85.7 0.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ALA-217   ASP-218  19.9 21.0 -29.9 16.0 63.9 57.3 34.5
 ASP-218   LYS-219  16.8 17.5 -36.3 6.4 76.8 80.5 100.1
 LYS-219   ILE-220  15.3 15.3 -101.3 81.2 40.7 63.5 115.4
 ILE-220   GLN-221  16.2 18.0 32.6 -15.4 135.6 164.8 -81.4
 GLN-221   LEU-222  13.3 16.9 30.4 -29.4 62.6 101.9 -11.0
 LEU-222   ILE-223  11.5 13.4 36.0 -1.4 92.9 97.9 -22.1
 ILE-223   ASN-224  14.1 14.9 3.4 11.2 156.9 155.6 -54.1
 ASN-224   ASN-225  14.4 15.5 -14.1 -2.9 72.8 72.2 17.3
 ASN-225   MET-226  10.7 11.8 12.1 -4.6 57.9 51.8 14.7
 MET-226   LEU-227  11.2 11.4 5.3 -5.5 110.5 100.9 0.9
 LEU-227   ASP-228  14.5 14.6 8.5 1.9 134.8 135.0 -32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-391   SER-392  1.3 1.0 7.8 -40.3 124.3 125.7 78.4
 SER-392   THR-393  1.9 1.8 1.9 11.0 61.7 72.4 18.8
 THR-393   GLY-394  5.5 5.5 0.2 21.8 123.5 133.0 -35.4
 GLY-394   GLY-395  6.5 5.8 28.4 -39.6 101.5 86.3 -20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees