Probable Butyrate Kinase 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-129   VAL-130  1.9 2.1 -1.8 5.8 106.1 105.8 53.0
 VAL-130   VAL-131  3.6 4.0 3.6 -8.5 18.4 18.9 -37.0
 VAL-131   VAL-132  2.6 2.8 3.2 -5.8 79.4 80.5 18.4
 VAL-132   ASP-133  1.9 1.8 -22.0 21.7 127.0 122.8 23.1
 ASP-133   GLU-134  4.4 4.2 -1.6 -12.0 96.4 98.9 4.0
 GLU-134   MET-135  8.0 7.7 20.0 -14.0 60.9 75.7 6.0
 MET-135   GLU-136  9.8 9.8 17.2 0.2 41.3 41.1 49.0
 GLU-136   ASP-137  12.3 12.2 21.7 -21.9 36.3 35.0 -4.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-330   GLY-331  13.2 13.4 10.7 -3.2 97.9 97.0 -15.3
 GLY-331   SER-332  10.8 10.8 -8.4 16.4 49.1 47.2 -31.7
 SER-332   ASN-333  7.4 7.6 53.7 -20.0 69.3 66.6 66.6
 ASN-333   GLU-334  4.4 4.1 -60.8 31.3 44.1 51.6 119.0
 GLU-334   GLU-335  2.7 3.2 6.2 -16.0 69.9 65.5 -8.8
 GLU-335   LYS-336  2.8 2.7 -37.5 30.6 101.1 95.7 11.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees