Thermolysin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-83   TYR-84  2.3 2.2 4.8 -3.7 45.0 43.6 46.3
 TYR-84   LYS-85  1.1 1.2 -0.6 -1.4 157.2 158.5 -37.8
 LYS-85   ASN-86  1.6 1.6 4.7 -2.8 66.5 67.6 45.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-89   ARG-90  1.4 1.4 3.3 -5.6 77.5 79.8 36.0
 ARG-90   LEU-91  3.9 3.9 0.4 -1.3 71.9 70.8 27.0
 LEU-91   SER-92  5.8 5.9 0.1 -4.1 42.5 46.0 -13.3
 SER-92   TYR-93  7.2 7.5 0.2 -5.8 79.5 85.5 -39.0
 TYR-93   ASP-94  8.7 9.1 10.0 -7.9 132.7 134.3 13.1
 ASP-94   GLY-95  11.2 11.6 -4.0 4.7 24.4 27.2 34.4
 GLY-95   ASN-96  8.7 8.9 5.6 -9.2 126.3 126.8 12.1
 ASN-96   ASN-97  10.9 11.0 8.0 -4.5 64.6 59.1 -42.6
 ASN-97   ALA-98  10.4 10.6 2.5 5.8 52.6 53.3 136.2
 ALA-98   ALA-99  13.0 13.2 -3.7 -7.1 136.0 139.0 -156.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-135   GLY-136  4.5 4.5 0.8 4.9 67.2 67.6 47.4
 GLY-136   ILE-137  1.1 1.1 6.4 0.2 9.8 6.4 45.4
 ILE-137   ASP-138  1.5 1.6 0.6 -5.8 73.9 72.3 -11.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-179   ALA-180  7.7 7.6 1.7 -4.1 66.0 68.2 -61.4
 ALA-180   ASN-181  7.7 7.9 1.5 -4.0 66.6 64.5 -17.1
 ASN-181   LYS-182  10.9 10.8 1.5 -4.9 39.4 30.9 20.6
 LYS-182   ASN-183  11.3 10.4 161.8 -174.9 40.5 48.7 -31.8
 ASN-183   PRO-184  10.5 11.2 -1.3 5.2 81.8 74.6 42.0
 PRO-184   ASP-185  10.0 10.2 -5.0 3.4 119.0 116.1 86.7
 ASP-185   TRP-186  11.4 11.4 0.4 1.8 110.1 108.1 -1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees