Saccharopine Dehydrogenase, Nad+, L-Lysine- Forming
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-123
LEU-124
1.7
2.0
9.9
-8.3
96.2
96.3
24.7
LEU-124
GLU-125
3.0
2.7
7.0
6.1
94.0
92.6
-47.4
GLU-125
ASN-126
4.4
4.1
-12.9
-1.8
77.9
88.4
65.4
ASN-126
ASP-127
8.2
7.8
-2.1
0.5
16.7
25.5
13.1
ASP-127
GLN-128
10.1
10.3
-1.9
6.0
74.9
75.2
-23.0
GLN-128
GLY-129
10.6
11.0
-5.3
7.9
95.6
84.7
9.6
GLY-129
ARG-130
7.1
7.6
4.1
-12.3
23.0
36.7
-34.7
ARG-130
ARG-131
7.7
7.4
9.3
0.9
61.6
63.6
27.5
ARG-131
VAL-132
4.6
4.2
-6.3
8.1
130.0
133.2
11.4
VAL-132
ALA-133
5.7
4.8
-13.8
4.9
166.9
166.4
-81.9
ALA-133
ALA-134
3.6
2.8
3.0
-3.6
88.6
82.5
54.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-169
PRO-170
5.2
4.7
14.9
-1.6
83.0
77.8
45.4
PRO-170
ASN-171
2.6
2.0
-6.1
4.9
105.5
111.7
-8.2
ASN-171
GLU-172
1.5
1.7
-4.7
-4.2
92.1
92.1
-43.3
GLU-172
LYS-173
5.2
5.2
-3.6
-0.2
27.6
32.5
46.5
LYS-173
ALA-174
6.2
6.8
6.0
-7.1
112.3
122.5
-27.4
ALA-174
LEU-175
5.0
5.0
6.2
-5.6
61.3
68.8
-10.9
LEU-175
VAL-176
7.4
7.4
5.1
-0.2
108.8
103.1
-10.0
VAL-176
LYS-177
10.0
10.1
1.9
-3.0
159.3
161.7
-9.4
LYS-177
ASP-178
9.7
9.9
5.9
-8.3
90.1
100.5
-3.2
ASP-178
VAL-179
10.9
10.8
4.9
2.0
67.6
64.2
-9.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-325
PRO-326
4.0
3.5
4.7
4.5
60.1
52.9
80.6
PRO-326
ARG-327
3.3
3.1
5.3
-4.5
91.7
89.1
6.4
ARG-327
GLU-328
2.3
2.4
5.6
-9.3
56.6
55.8
-26.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees