Shikimate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-105
ASP-106
6.1
6.0
-12.6
11.3
74.6
76.5
29.3
ASP-106
TRP-107
2.8
2.8
-3.1
3.5
103.7
99.6
31.4
TRP-107
ILE-108
2.4
1.9
-0.4
-2.0
50.7
50.5
4.1
ILE-108
GLY-109
5.4
5.0
3.8
-10.1
151.5
154.1
33.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-236
PRO-237
3.9
4.1
-10.6
9.4
78.5
79.2
20.9
PRO-237
MET-238
1.8
1.7
-5.2
4.2
30.2
32.5
8.0
MET-238
LEU-239
0.9
0.9
5.8
-6.5
85.0
87.8
-11.5
LEU-239
LEU-240
3.1
3.4
2.4
3.1
63.5
64.6
12.3
LEU-240
TRP-241
3.3
3.6
-3.7
3.1
59.5
55.6
10.4
TRP-241
GLN-242
4.3
4.3
-2.6
2.5
41.8
42.7
7.7
GLN-242
GLY-243
5.1
4.9
-5.1
-0.1
113.7
111.5
1.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees