Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-105
MET-106
9.4
9.0
-20.3
38.7
123.9
124.7
21.9
MET-106
THR-107
5.7
5.6
-11.9
-25.7
46.8
46.6
101.7
THR-107
LEU-108
2.5
2.6
-19.2
12.0
119.3
125.1
-36.4
LEU-108
GLY-109
1.4
1.2
13.7
-4.9
135.0
124.8
-25.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-213
LYS-214
3.2
3.8
-26.8
33.1
113.1
104.5
-6.6
LYS-214
GLY-215
1.2
1.6
-60.6
31.5
43.4
58.4
92.4
GLY-215
TYR-216
3.8
2.9
-34.9
5.1
85.2
83.5
19.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-251
ARG-252
3.4
3.7
14.1
-28.7
32.1
36.0
-63.9
ARG-252
GLY-253
3.0
2.6
24.6
14.2
49.5
49.7
109.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees