Adp-Dependent Glucokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-39   ASN-40  1.1 1.7 -5.2 7.4 79.7 81.0 7.9
 ASN-40   ILE-41  2.7 2.6 -10.4 1.8 146.7 148.4 -30.4
 ILE-41   ASP-42  5.6 5.2 -15.2 17.3 115.5 111.2 19.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-117   ILE-118  5.2 4.7 8.2 -5.9 30.8 33.6 3.4
 ILE-118   GLY-119  2.9 1.9 -16.2 -3.2 95.3 98.6 9.8
 GLY-119   GLY-120  2.3 2.8 -17.1 15.6 123.7 132.4 10.7
 GLY-120   GLN-121  3.2 4.6 4.1 7.8 125.6 114.4 -26.6
 GLN-121   ALA-122  6.0 7.2 -17.1 7.9 92.0 92.4 22.0
 ALA-122   GLY-123  5.9 6.6 -2.3 -1.0 57.5 55.7 15.4
 GLY-123   ILE-124  3.2 3.7 3.8 -6.8 171.7 171.3 15.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-182   ILE-183  7.0 6.7 16.7 0.1 22.2 28.2 79.4
 ILE-183   HIS-184  8.9 8.8 1.6 -9.6 81.0 86.2 -16.4
 HIS-184   TYR-185  9.4 9.5 19.5 -10.7 34.7 30.8 34.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-211   ASP-212  8.2 9.0 55.2 -28.9 27.9 33.1 116.7
 ASP-212   TYR-213  7.8 8.1 49.2 -32.8 73.8 72.2 56.6
 TYR-213   ASN-214  4.0 4.5 -7.1 5.5 66.8 64.3 20.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-441   SER-442  13.5 13.4 -170.6 179.4 79.1 61.8 -34.2
 SER-442   PRO-443  12.7 11.9 0.0 10.6 105.5 134.1 -18.8
 PRO-443   LYS-444  9.6 10.1 -10.9 3.3 67.3 65.3 27.1
 LYS-444   SER-445  7.3 8.8 39.3 -95.7 173.8 153.5 272.3
 SER-445   THR-446  6.5 9.6 -107.2 170.8 65.4 74.6 -156.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-448   ILE-449  6.6 7.4 -56.1 6.7 55.3 49.0 131.5
 ILE-449   GLY-450  9.1 9.5 8.6 -1.7 59.7 61.7 10.2
 GLY-450   ASP-451  11.8 12.2 -4.0 4.4 118.2 116.9 -0.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees