Putative Enzyme Ydif
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-275
ASP-276
20.2
20.2
-4.5
17.7
51.5
55.8
-232.4
PRO-284
LEU-285
23.0
22.7
-33.7
-5.3
135.2
140.5
-859.5
LEU-285
ASN-286
22.1
22.2
12.1
-11.8
152.0
150.1
80.1
LEU-285
ASN-286
22.1
22.2
12.1
-11.8
152.0
150.1
80.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-285
ASN-286
22.1
22.2
12.1
-11.8
152.0
150.1
80.1
LEU-285
ASN-286
22.1
22.2
12.1
-11.8
152.0
150.1
80.1
ASN-286
GLN-287
22.8
22.8
-3.1
-6.1
47.2
52.4
137.1
GLN-287
ARG-288
21.2
21.0
15.7
-10.7
84.1
89.0
-103.7
ARG-288
LYS-289
18.7
18.7
5.9
0.3
44.3
38.7
-32.0
LYS-289
LEU-290
17.5
17.7
-0.1
-1.7
78.3
79.5
-63.5
LEU-290
VAL-291
17.5
17.5
0.3
0.2
123.0
123.1
0.4
VAL-291
ALA-292
15.0
14.9
2.6
-3.7
59.6
59.1
-39.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-297
GLU-298
8.5
8.4
-3.8
7.2
60.3
58.5
31.7
ARG-300
LYS-301
3.2
2.9
2.9
-3.8
47.6
47.9
70.0
LYS-301
GLY-302
3.0
2.9
-4.8
4.5
65.2
68.8
4.5
GLY-302
ALA-303
5.0
5.0
-7.4
2.0
17.9
18.5
101.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-305
ASN-306
5.5
5.5
5.0
-2.8
74.4
74.3
-73.2
ASN-306
VAL-307
8.1
8.2
-9.6
13.1
103.2
100.5
60.9
VAL-307
GLY-308
9.7
9.8
12.2
-17.2
54.0
55.7
-28.0
GLY-308
VAL-309
12.0
12.2
-11.0
8.6
103.6
100.6
-25.0
GLY-308
VAL-309
12.0
12.2
-11.0
8.6
103.6
100.6
-25.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-308
VAL-309
12.0
12.2
-11.0
8.6
103.6
100.6
-25.0
GLY-308
VAL-309
12.0
12.2
-11.0
8.6
103.6
100.6
-25.0
VAL-309
GLY-310
15.5
15.8
-1.4
-7.7
65.7
61.0
98.8
GLY-310
ILE-311
16.1
16.5
-1.0
1.2
134.9
132.0
22.1
ILE-311
ALA-312
16.3
16.3
14.4
-2.1
36.6
45.1
306.2
ALA-312
ASP-313
13.2
13.0
-18.1
11.1
126.1
134.2
-44.9
ASP-313
GLY-314
13.9
14.2
-10.6
11.9
164.8
160.2
-16.9
GLY-314
ILE-315
14.7
14.8
-10.3
1.6
118.7
119.5
-143.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-319
ARG-320
8.8
9.0
-2.1
-1.5
16.4
18.2
93.6
ARG-320
GLU-321
10.4
10.7
-1.7
4.4
59.2
60.4
-79.9
GLU-321
GLU-322
12.6
12.8
-3.6
2.5
76.3
75.0
130.6
GLU-322
GLY-323
10.1
10.3
-2.9
1.5
126.0
128.8
-12.9
GLU-322
GLY-323
10.1
10.3
-2.9
1.5
126.0
128.8
-12.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-322
GLY-323
10.1
10.3
-2.9
1.5
126.0
128.8
-12.9
GLU-322
GLY-323
10.1
10.3
-2.9
1.5
126.0
128.8
-12.9
GLY-323
CYS-324
7.5
7.6
4.5
-6.3
111.4
112.2
98.2
CYS-324
ALA-325
4.6
4.8
-3.7
-3.5
58.7
59.0
85.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-371
ASP-372
6.8
6.7
-3.8
0.3
90.0
90.0
-2.8
ASP-372
VAL-373
4.3
4.3
-1.7
1.9
111.1
109.8
68.7
VAL-373
CYS-374
1.6
1.6
-5.6
2.6
104.3
104.7
-27.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-376
SER-377
9.1
9.2
-2.3
9.6
69.7
72.2
-10.9
SER-377
PHE-378
12.3
12.3
7.7
-4.9
168.6
164.7
-51.6
PHE-378
ALA-379
12.5
12.6
-4.9
2.7
67.9
69.0
66.9
ALA-379
GLU-380
15.3
15.4
4.6
-2.9
123.1
124.8
-39.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-385
ASN-386
7.4
7.5
-2.4
1.2
88.7
86.2
13.6
ASN-386
VAL-387
6.1
6.3
-1.0
-1.8
119.0
120.9
-5.8
VAL-387
GLY-388
8.3
8.4
-0.4
-0.3
63.9
65.0
-4.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-411
ILE-412
1.8
1.7
0.7
0.7
71.9
72.8
40.8
ILE-412
ILE-413
1.9
2.0
2.0
-4.2
98.7
98.9
22.3
ILE-413
PHE-414
5.4
5.4
-1.4
2.5
114.3
113.1
1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-418
THR-419
19.0
18.9
7.8
1.4
133.8
136.2
-236.9
THR-419
ALA-420
21.8
21.6
3.3
-4.3
70.5
72.0
-68.6
ALA-420
GLY-421
23.2
22.8
1.3
-0.9
111.5
112.4
29.5
GLY-421
SER-422
26.6
26.2
1.8
-27.6
58.5
51.9
-344.2
SER-422
LEU-423
29.0
28.4
29.6
-11.7
59.3
73.4
184.3
LEU-423
LYS-424
26.9
26.8
12.2
-2.5
18.5
18.1
189.9
LYS-424
THR-425
28.5
28.4
2.1
7.7
65.0
66.2
26.9
THR-425
GLU-426
27.1
27.2
8.8
11.3
9.1
12.8
578.7
GLU-426
ILE-427
27.4
28.0
-14.1
-7.1
112.8
112.1
-387.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-430
LYS-431
26.1
25.9
4.3
-7.1
167.3
166.8
102.3
LYS-431
LEU-432
26.8
26.5
3.8
-6.8
120.7
120.7
32.9
LEU-432
ASN-433
25.9
25.7
1.1
1.2
117.2
121.0
-34.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-434
VAL-435
28.8
28.7
3.5
-16.6
82.9
84.3
-93.7
VAL-435
GLN-436
31.7
31.8
9.3
2.4
23.0
31.1
263.2
GLN-436
GLU-437
31.2
31.2
-20.8
20.4
118.1
117.8
-57.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-446
LEU-447
11.5
11.5
-5.5
13.8
107.7
107.0
113.6
LEU-447
PRO-448
11.0
11.0
-5.1
6.9
36.6
33.7
-66.1
PRO-448
GLU-449
12.2
12.3
-8.3
3.1
99.1
98.1
70.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-455
ILE-456
3.9
3.6
-7.7
4.1
67.4
64.8
54.4
ILE-456
ALA-457
3.5
3.4
-4.1
-3.2
11.8
14.4
158.5
ALA-457
LEU-458
3.0
2.9
8.1
-4.2
97.6
98.3
-132.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-524
VAL-525
10.7
10.8
5.2
-4.1
71.1
62.5
105.3
VAL-525
LEU-526
8.2
8.4
-2.8
-4.3
33.7
40.4
159.6
LEU-526
PRO-527
5.5
5.4
-8.8
-13.9
88.3
86.1
-74.6
PRO-527
GLU-528
7.5
7.1
3.4
-46.9
78.8
94.2
-232.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees