Non-Ribosomal Peptide Synthetase Modules

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-177   GLN-178  5.9 6.3 -0.5 -15.8 76.5 75.8 0.6
 GLN-178   LEU-179  3.8 4.1 19.5 -1.3 32.0 46.3 87.1
 LEU-179   LEU-180  2.5 1.5 -1.9 -5.0 129.8 141.8 -41.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-268   GLY-269  19.7 19.6 7.8 -0.1 55.5 57.9 17.7
 GLY-269   LEU-270  16.6 16.5 11.6 -1.2 20.9 25.9 60.4
 LEU-270   PRO-271  16.9 16.9 -10.2 17.6 121.8 120.3 24.1
 PRO-271   VAL-272  14.0 14.2 10.4 -19.2 158.7 159.0 51.5
 PRO-271   VAL-272  14.0 14.2 10.4 -19.2 158.7 159.0 51.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-271   VAL-272  14.0 14.2 10.4 -19.2 158.7 159.0 51.5
 PRO-271   VAL-272  14.0 14.2 10.4 -19.2 158.7 159.0 51.5
 VAL-272   LYS-273  13.6 13.4 11.7 9.0 119.6 116.5 -213.3
 LYS-273   VAL-274  11.2 11.1 -137.9 115.9 72.5 85.6 85.8
 VAL-274   ARG-275  9.8 9.3 -91.3 -8.5 15.9 30.4 777.9
 ARG-275   PHE-276  10.2 8.7 -34.2 33.2 86.2 47.3 -64.0
 PHE-276   GLY-277  9.3 9.7 134.0 -64.5 157.7 139.5 -461.8
 GLY-277   ALA-278  8.3 8.5 -139.0 28.0 70.9 85.4 217.7
 ALA-278   ASP-279  5.2 4.8 -142.3 8.9 55.8 136.9 -474.7
 ASP-279   ARG-280  6.2 4.6 -4.0 62.7 96.8 86.6 -126.3
 ARG-280   HIS-281  5.7 7.9 -168.9 -48.7 168.1 66.1 581.0
 HIS-281   ILE-282  7.1 6.5 -101.9 -23.7 105.7 114.0 -348.6
 ILE-282   PRO-283  4.9 5.0 -5.4 4.1 139.9 143.4 2.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-284   MET-285  6.6 6.6 -144.5 -30.9 106.5 135.3 -1002.3
 MET-285   LYS-286  4.3 5.6 4.2 -37.3 63.8 94.8 71.9
 LYS-286   SER-287  6.5 5.0 151.7 38.1 90.2 51.7 823.5
 SER-287   ASN-288  8.9 8.1 18.5 -47.3 33.8 31.6 -161.8
 ASN-288   THR-289  9.3 9.0 56.6 -45.9 68.1 66.4 -29.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-321   TYR-322  10.8 10.1 2.7 -18.2 153.6 155.7 53.2
 TYR-322   PRO-323  11.1 10.7 0.2 2.7 118.8 132.0 -12.3
 PRO-323   SER-324  8.0 8.0 -11.9 -4.8 25.2 29.5 134.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-325   ALA-326  5.9 6.8 -1.1 1.4 103.8 96.1 16.0
 ALA-326   LEU-327  7.8 8.3 0.1 6.4 60.8 69.4 39.2
 LEU-327   ARG-328  10.8 11.5 -1.8 10.3 162.4 174.2 65.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-346   MET-347  21.9 20.6 -0.5 44.2 147.8 139.1 274.8
 MET-347   PRO-348  21.2 19.5 -52.0 -11.5 109.9 143.7 -281.4
 PRO-348   PHE-349  23.5 21.1 -117.5 -33.8 84.4 137.8 -401.2
 PHE-349   ASP-350  23.9 19.6 -23.2 26.3 141.8 111.1 36.9
 ASP-350   LEU-351  21.8 22.0 -17.1 -20.4 131.2 65.4 64.7
 LEU-351   ASP-352  23.4 23.9 -159.4 -16.8 88.5 130.9 676.0
 ASP-352   LEU-353  25.0 25.3 -20.5 -34.4 136.0 122.4 -322.4
 LEU-353   SER-354  24.0 24.2 4.3 -5.8 61.3 52.2 25.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-372   LEU-373  16.1 16.9 -15.5 0.6 64.4 57.5 51.9
 LEU-373   MET-374  19.1 19.7 3.4 -3.5 163.4 156.8 8.7
 MET-374   LEU-375  19.1 19.4 5.2 4.0 113.7 118.2 -11.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees