Dihydrodipicolinate Reductase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-96   ASN-97  9.6 9.6 1.9 1.1 51.1 52.5 4.2
 ASN-97   PHE-98  6.1 6.1 -9.6 2.7 81.8 83.1 -1.0
 PHE-98   SER-99  4.7 4.7 -12.4 33.0 109.2 114.5 49.5
 SER-99   ILE-100  1.0 1.2 -30.2 1.0 37.8 40.4 58.5
 ILE-100   GLY-101  2.7 2.8 4.7 -2.7 107.5 106.0 -7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-180   ALA-181  7.5 7.4 1.8 -2.3 97.5 96.0 6.3
 ALA-181   ILE-182  4.1 4.0 2.0 -3.9 169.8 170.4 2.8
 ILE-182   SER-183  3.6 3.3 12.6 -44.6 122.8 113.2 63.6
 SER-183   ARG-184  1.6 1.4 10.8 5.7 45.5 43.9 23.2
 ARG-184   THR-185  4.5 4.2 -2.0 -3.8 106.2 106.7 -4.7
 THR-185   VAL-186  4.7 4.5 6.0 2.9 19.7 21.1 31.9
 VAL-186   PHE-187  3.0 2.8 -3.5 -0.7 136.5 134.5 -19.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-210   VAL-211  6.7 7.0 13.4 0.0 45.9 47.4 0.4
 VAL-211   ILE-212  8.5 8.8 -2.1 -2.4 108.1 106.1 0.9
 ILE-212   PHE-213  7.0 7.3 -12.0 -165.9 44.6 46.2 -379.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees