Serum Albumin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-497   VAL-498  8.8 8.8 3.0 -1.8 86.5 90.3 -55.1
 VAL-498   PRO-499  10.2 9.8 -0.3 33.5 152.7 152.8 187.1
 PRO-499   LYS-500  8.6 8.4 -12.1 31.7 128.1 137.6 225.4
 LYS-500   GLU-501  10.5 9.7 63.4 -109.6 74.5 79.4 -85.7
 GLU-501   PHE-502  11.6 12.0 -139.2 113.0 136.1 163.2 -276.5
 PHE-502   ASN-503  11.0 11.9 24.9 -65.0 31.5 58.2 -294.2
 ASN-503   ALA-504  11.5 13.8 29.2 17.8 53.1 31.1 397.0
 ALA-504   GLU-505  12.4 13.4 -15.6 -8.9 144.2 112.3 -71.5
 GLU-505   THR-506  11.4 12.1 13.5 53.3 85.5 122.5 -70.4
 THR-506   PHE-507  7.7 9.5 -69.9 -11.3 80.9 122.8 -102.0
 PHE-507   THR-508  7.4 7.1 109.8 1.9 39.6 36.5 815.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-510   ALA-511  7.1 7.9 -45.7 30.7 56.8 73.1 -1.3
 ALA-511   ASP-512  8.0 7.9 -13.6 43.0 61.2 73.5 -75.5
 ASP-512   ILE-513  4.5 4.3 -9.3 -1.0 124.4 117.4 3.8
 ILE-513   CYS-514  5.0 4.5 -1.9 2.9 68.9 66.5 -1.8
 CYS-514   THR-515  8.2 7.6 5.5 -2.0 136.0 137.8 -42.7
 THR-515   LEU-516  6.4 5.9 -7.1 16.0 110.3 110.3 50.2
 LEU-516   SER-517  6.3 5.8 -8.5 8.8 106.4 102.1 38.0
 SER-517   GLU-518  9.8 9.3 0.1 9.9 23.3 25.1 111.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-535   LYS-536  5.7 6.0 7.6 -2.1 147.4 143.6 -25.1
 LYS-536   PRO-537  4.9 5.1 -10.4 34.1 67.2 63.5 -104.0
 PRO-537   LYS-538  1.6 1.8 -39.4 -2.6 27.4 47.8 321.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-557   CYS-558  16.4 16.5 13.0 -8.3 136.2 134.3 -55.6
 CYS-558   CYS-559  14.6 14.4 -6.8 -10.0 35.4 36.3 147.5
 CYS-559   LYS-560  12.9 12.6 -15.2 26.7 45.5 50.9 -41.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-561   ASP-562  18.0 17.8 157.6 -161.3 28.5 29.5 -39.4
 ASP-562   ASP-563  17.5 17.8 -18.7 2.6 86.6 95.6 25.7
 ASP-563   LYS-564  17.0 18.3 -12.0 63.9 131.3 107.2 297.5
 LYS-564   GLU-565  15.8 15.8 126.2 -145.1 51.3 30.0 -107.0
 LYS-564   GLU-565  15.8 15.8 126.2 -145.1 51.3 30.0 -107.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-564   GLU-565  15.8 15.8 126.2 -145.1 51.3 30.0 -107.0
 LYS-564   GLU-565  15.8 15.8 126.2 -145.1 51.3 30.0 -107.0
 GLU-565   THR-566  13.3 13.2 49.2 -19.4 40.6 51.3 209.7
 THR-566   CYS-567  16.5 16.0 35.9 -5.1 28.7 20.8 261.8
 CYS-567   PHE-568  16.8 16.7 11.7 1.3 61.7 55.6 58.8
 PHE-568   ALA-569  13.1 13.2 19.7 -15.2 58.4 58.0 20.5
 ALA-569   GLU-570  13.4 14.9 1.8 3.0 48.9 47.0 80.3
 GLU-570   GLU-571  16.9 18.0 -29.8 10.4 139.5 138.8 -158.1
 GLU-571   GLY-572  16.3 16.6 8.5 -1.0 47.9 59.4 27.7
 GLY-572   LYS-573  13.2 13.5 0.7 -20.5 55.6 35.2 -102.2
 LYS-573   LYS-574  15.8 15.9 22.3 7.5 38.9 51.8 182.4
 LYS-574   LEU-575  17.7 17.5 -20.5 21.0 129.6 134.0 32.6
 LEU-575   VAL-576  14.8 14.5 -16.4 21.1 125.0 136.9 2.1
 VAL-576   ALA-577  12.9 13.6 -15.1 13.5 142.2 138.9 -34.2
 ALA-577   ALA-578  16.0 16.9 -10.0 5.6 131.9 128.9 -9.3
 ALA-578   SER-579  15.7 16.2 -15.2 31.6 123.3 124.0 68.1
 SER-579   GLN-580  12.1 12.5 -27.9 10.8 132.7 147.0 -157.2
 GLN-580   ALA-581  12.5 13.5 3.0 8.5 28.5 43.3 96.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees