Leu/ile/val-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-116   THR-117  9.7 10.0 0.7 7.4 146.3 146.7 -8.6
 THR-117   THR-118  9.8 9.9 2.9 -14.6 122.5 117.0 8.8
 THR-118   GLY-119  6.8 6.6 30.4 -5.8 63.9 50.8 15.8
 GLY-119   LEU-120  3.2 3.1 29.4 -8.1 64.4 41.4 12.6
 LEU-120   ASP-121  1.8 2.1 -13.5 -19.8 68.1 76.8 21.1
 ASP-121   SER-122  4.1 4.8 31.7 -22.5 74.4 65.2 -3.4
 SER-122   ASP-123  4.3 4.4 19.3 -43.6 122.2 134.3 28.5
 ASP-123   GLN-124  3.8 4.1 -31.0 10.2 40.8 42.8 35.4
 GLN-124   GLY-125  5.8 5.1 -15.1 -1.0 104.5 97.1 -3.5
 GLY-125   PRO-126  8.8 8.5 9.6 -2.0 104.2 102.4 4.3
 PRO-126   THR-127  9.6 9.6 1.6 0.1 169.4 166.5 -3.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-246   THR-247  9.6 9.9 11.0 -3.9 105.9 107.5 10.3
 THR-247   LYS-248  6.6 6.9 3.5 -4.1 92.9 88.8 14.0
 LYS-248   PRO-249  3.9 4.7 0.4 -15.9 80.9 81.6 -6.9
 PRO-249   LYS-250  1.5 2.8 17.9 16.4 28.0 14.9 51.9
 LYS-250   ASN-251  2.0 2.1 1.3 15.9 60.5 55.6 17.1
 ASN-251   TYR-252  3.7 4.0 -4.9 2.5 97.9 98.1 2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-323   LEU-324  6.7 7.1 0.1 -9.1 129.9 132.7 3.0
 LEU-324   LYS-325  7.6 7.8 -10.1 34.0 102.0 94.6 -2.4
 LYS-325   GLY-326  8.6 8.6 0.5 -5.6 144.7 155.9 5.8
 GLY-326   PHE-327  9.4 7.9 -3.9 0.5 34.4 49.4 0.2
 PHE-327   GLU-328  6.6 4.8 9.8 -19.9 121.5 103.8 11.2
 GLU-328   PHE-329  6.0 3.2 3.3 -12.4 129.0 123.3 16.2
 PHE-329   GLY-330  3.2 1.8 -33.4 -7.1 31.1 46.5 51.7
 GLY-330   VAL-331  4.1 3.6 6.3 12.6 93.7 98.3 -3.6
 VAL-331   PHE-332  7.0 6.9 -2.7 -2.4 14.4 13.1 8.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees