Replication Protein E1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-365   ARG-366  3.2 3.3 2.4 8.1 147.7 148.8 -143.7
 ARG-366   HIS-367  5.0 5.0 -28.2 20.4 47.9 53.7 85.3
 HIS-367   TYR-368  2.2 2.0 -14.8 12.8 93.4 101.8 33.3
 TYR-368   LEU-369  1.8 1.7 7.0 -9.3 112.0 106.1 51.8
 LEU-369   ARG-370  5.2 5.0 -6.4 -1.3 8.1 13.2 115.3
 ARG-370   ALA-371  4.8 4.9 -9.7 19.4 67.8 71.2 -11.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees