Putative Sugar Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-150   GLY-151  6.4 6.3 -5.8 5.8 54.7 52.6 -8.8
 GLY-151   THR-152  4.4 4.2 -9.6 5.4 41.1 43.0 38.1
 THR-152   ASP-153  2.6 2.5 0.0 1.9 70.4 69.4 -3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-285   GLN-286  5.5 5.3 8.9 -20.4 142.2 165.7 169.7
 GLN-286   GLU-287  5.8 6.0 -9.9 2.3 82.6 80.4 25.0
 GLU-287   PRO-288  9.0 9.0 1.0 2.0 150.9 148.4 -20.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-314   GLU-315  7.8 7.7 -2.1 21.5 29.9 26.2 -133.1
 GLU-315   THR-316  7.3 7.5 -22.2 -3.6 71.0 73.8 141.3
 THR-316   LYS-317  4.2 4.2 3.1 -28.0 166.5 152.4 229.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees