Lipopolysaccharide Heptosyltransferase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-179   TYR-180  11.5 12.0 80.5 -20.8 92.6 106.2 -172.1
 TYR-180   ALA-181  8.1 8.5 8.2 -1.6 35.7 39.7 36.8
 ALA-181   VAL-182  6.8 6.7 -1.7 -4.3 97.3 97.4 -37.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-242   SER-243  11.2 10.7 -14.4 -14.4 11.4 19.0 302.8
 SER-243   LEU-244  11.5 11.2 -2.9 12.0 72.8 68.5 -49.5
 LEU-244   GLU-245  8.6 8.3 -0.8 2.3 94.4 96.0 15.9
 GLU-245   GLY-246  10.1 9.9 -7.9 2.4 18.2 24.6 31.1
 GLU-245   GLY-246  10.1 9.9 -7.9 2.4 18.2 24.6 31.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-245   GLY-246  10.1 9.9 -7.9 2.4 18.2 24.6 31.1
 GLU-245   GLY-246  10.1 9.9 -7.9 2.4 18.2 24.6 31.1
 GLY-246   VAL-247  10.2 9.8 -4.7 9.0 74.5 77.2 23.4
 VAL-247   ALA-248  6.4 6.0 -3.6 -3.2 118.8 120.6 -20.9
 ALA-248   ARG-249  6.5 6.1 0.6 0.8 121.0 115.1 -25.9
 ARG-249   VAL-250  9.4 9.2 2.2 -3.7 141.9 141.3 38.2
 VAL-250   LEU-251  7.1 7.1 -0.3 3.2 108.8 106.7 24.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees