Lactoferrin ()

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-326   ALA-327  10.1 10.2 -0.7 -4.4 68.0 66.2 94.8
 ALA-327   ILE-328  13.0 13.0 -9.4 5.6 19.7 21.2 40.7
 ILE-328   GLN-329  11.8 12.0 4.9 12.7 94.5 87.4 -16.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-680   PRO-681  14.2 14.2 -9.5 1.8 146.4 144.7 -58.1
 PRO-681   LEU-682  12.7 12.6 -5.7 -3.7 76.8 83.1 65.4
 LEU-682   LEU-683  9.4 9.1 2.4 10.9 114.8 114.5 -8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees