Sarcoplasmic/endoplasmic Reticulum Calcium Atpase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-41   PRO-42  15.3 14.8 -24.9 -5.6 128.8 137.4 -60.2
 PRO-42   ALA-43  14.7 14.1 61.3 -62.5 61.4 48.1 -3.7
 ALA-43   GLU-44  11.3 12.5 -93.2 19.2 164.6 145.7 -168.8
 GLU-44   GLU-45  11.5 15.6 -174.0 -29.2 129.2 140.2 425.8
 GLU-45   GLY-46  10.7 14.9 21.4 35.9 78.4 60.7 56.4
 GLY-46   LYS-47  7.0 12.4 56.4 -42.9 22.6 110.7 38.5
 LYS-47   SER-48  6.9 9.4 -73.8 -81.7 108.9 110.9 -83.0
 SER-48   LEU-49  3.8 6.6 -22.4 -81.4 171.7 161.6 -272.2
 LEU-49   TRP-50  3.4 5.9 -164.3 -13.7 106.5 112.6 237.5
 TRP-50   GLU-51  0.4 4.1 125.2 28.3 78.8 61.4 358.0
 GLU-51   LEU-52  3.8 1.1 -8.2 19.6 154.4 156.9 22.5
 LEU-52   VAL-53  4.4 1.1 -171.4 0.1 139.9 140.9 -439.7
 VAL-53   ILE-54  1.2 0.5 -16.7 52.5 91.9 123.3 8.6
 ILE-54   GLU-55  3.7 3.2 47.3 -9.4 96.6 104.2 -13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-118   LEU-119  10.2 10.3 -29.7 -0.6 114.0 123.2 -31.4
 LEU-119   LYS-120  6.4 6.6 76.5 -56.7 50.9 68.9 14.6
 LYS-120   GLU-121  7.2 7.6 34.0 -44.6 13.3 3.9 -22.8
 GLU-121   TYR-122  7.9 6.9 111.8 -21.2 59.9 82.2 90.2
 TYR-122   GLU-123  4.4 3.3 -119.2 -41.2 90.0 147.5 -199.0
 GLU-123   PRO-124  3.3 3.2 -52.8 -44.1 158.0 97.6 419.4
 PRO-124   GLU-125  3.3 6.7 36.5 49.5 69.1 26.4 -522.6
 GLU-125   MET-126  6.0 9.1 -112.9 155.0 117.4 147.4 106.5
 MET-126   GLY-127  8.1 8.0 -52.5 150.9 99.6 136.9 117.0
 GLY-127   LYS-128  11.0 11.3 38.2 5.8 37.5 38.6 91.3
 LYS-128   VAL-129  11.7 11.9 3.3 3.6 86.6 87.8 2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-236   ASP-237  19.6 18.5 -36.7 19.8 137.8 143.1 -36.4
 ASP-237   GLN-238  20.4 19.0 -26.6 -10.5 150.4 138.6 -81.3
 GLN-238   MET-239  21.7 21.8 57.6 7.6 70.0 80.7 45.2
 MET-239   ALA-240  18.1 20.0 173.2 -24.4 88.4 22.3 332.6
 ALA-240   ALA-241  16.7 19.3 -139.0 48.2 138.9 97.7 -137.3
 ALA-241   THR-242  15.3 15.9 135.4 -4.2 42.6 92.0 108.3
 THR-242   GLU-243  17.2 13.6 61.0 43.9 98.3 44.0 -247.4
 GLU-243   GLN-244  15.1 12.1 -2.0 5.7 135.9 64.5 37.0
 GLN-244   ASP-245  13.5 10.1 73.3 70.6 117.8 48.8 22.8
 ASP-245   LYS-246  11.8 10.7 39.2 22.4 92.9 81.4 35.0
 LYS-246   THR-247  9.0 8.4 -3.0 -11.6 67.7 74.3 19.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees