Succinate Dehydrogenase [Ubiquinone] Flavoprotein Subunit, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-251   GLN-252  5.5 5.5 -1.7 4.0 68.0 72.5 16.7
 GLN-252   PHE-253  5.8 6.3 2.8 -15.7 138.7 137.1 25.5
 PHE-253   HIS-254  3.7 4.3 53.2 -42.5 116.8 114.6 35.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-362   THR-363  4.9 4.7 21.6 0.5 83.3 72.4 20.5
 THR-363   VAL-364  1.3 1.5 -17.4 -31.8 65.4 60.1 57.2
 VAL-364   HIS-365  2.9 2.5 0.8 10.3 57.5 59.0 8.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-482   VAL-483  4.1 3.0 54.2 -37.5 58.9 63.6 18.4
 VAL-483   PHE-484  3.4 3.9 22.0 11.8 25.6 51.4 71.1
 PHE-484   ARG-485  5.7 6.6 -39.4 17.6 108.9 130.9 -55.9
 ARG-485   VAL-486  5.8 5.1 -31.4 -3.2 148.2 145.5 -64.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees