Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-104
PHE-105
10.0
9.8
-10.7
1.3
145.3
139.8
-73.6
PHE-105
MET-106
11.1
11.3
15.8
-10.4
55.3
52.4
18.0
MET-106
THR-107
7.9
8.0
-27.8
13.7
49.2
53.7
90.3
THR-107
LEU-108
5.5
6.1
-0.9
-9.0
123.2
124.3
-92.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-109
ILE-110
3.1
3.2
6.1
2.5
64.8
59.4
21.1
ILE-110
SER-111
5.5
5.5
0.6
-0.1
64.0
64.8
-8.9
SER-111
ILE-112
8.1
8.1
-5.8
9.7
120.9
122.3
40.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-212
SER-213
5.6
5.8
-12.6
17.3
64.5
64.8
-19.0
SER-213
LYS-214
4.0
4.1
9.5
-2.6
66.7
71.7
61.6
LYS-214
GLY-215
2.2
2.1
-13.7
3.5
45.8
44.4
56.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-250
TRP-251
8.3
8.5
12.9
-5.8
85.8
90.3
-13.2
TRP-251
ARG-252
5.3
5.4
24.1
-37.3
34.4
34.1
-166.9
ARG-252
GLY-253
6.9
6.1
-12.1
39.1
134.9
125.6
156.5
GLY-253
ASN-254
4.8
3.0
49.7
14.4
63.5
35.5
429.5
ASN-254
GLY-255
5.3
2.0
3.7
-9.7
119.9
91.8
-27.7
GLY-255
CYS-256
5.5
5.5
-111.1
40.4
122.8
98.0
-213.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees