Maltose Transport System Permease Protein Malf

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-276   PHE-277  14.8 14.8 -33.3 8.9 96.4 85.6 -26.9
 PHE-277   LEU-278  11.8 12.4 2.4 -10.3 94.5 100.1 55.0
 LEU-278   ALA-279  9.5 9.9 1.1 6.8 42.8 44.6 50.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-447   THR-448  11.8 11.3 9.8 18.9 58.7 65.2 190.9
 THR-448   ASN-449  14.0 13.5 -160.0 121.1 138.3 121.9 -243.4
 ASN-449   GLY-450  15.7 14.9 13.8 6.2 30.1 34.8 123.9
 GLY-450   GLY-451  14.3 14.7 -8.1 117.2 80.1 80.6 -269.0
 GLY-451   PRO-452  16.8 15.3 94.7 7.7 87.5 73.4 317.1
 PRO-452   ASP-453  18.5 18.3 -28.2 -10.7 154.2 144.3 -259.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-469   TYR-470  13.2 13.0 1.9 0.5 53.7 52.2 23.4
 TYR-470   THR-471  14.9 14.6 -5.1 -3.5 114.7 108.4 2.5
 THR-471   TYR-472  15.6 16.1 18.8 -16.0 127.6 135.5 15.3
 TYR-472   ARG-473  17.4 17.5 0.9 13.4 92.7 97.8 3.5
 ARG-473   ILE-474  19.5 19.1 -13.3 28.9 145.6 133.0 103.3
 ILE-474   ALA-475  20.5 20.7 -33.0 16.2 78.9 101.4 46.2
 ILE-474   ALA-475  20.5 20.7 -33.0 16.2 78.9 101.4 46.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-474   ALA-475  20.5 20.7 -33.0 16.2 78.9 101.4 46.2
 ILE-474   ALA-475  20.5 20.7 -33.0 16.2 78.9 101.4 46.2
 ALA-475   PHE-476  21.5 22.4 -0.6 -11.2 135.3 148.5 26.8
 PHE-476   GLU-477  23.1 23.1 28.3 15.4 76.4 61.9 139.2
 GLU-477   GLY-478  23.8 23.1 -72.7 -136.0 34.3 79.3 -739.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees