DNA Polymerase III Subunit Gamma
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-6
ALA-7
15.4
15.4
1.8
9.4
12.3
11.1
102.5
ALA-7
ARG-8
15.9
15.7
-36.5
42.4
117.3
108.7
-12.3
ARG-8
LYS-9
19.1
19.1
-12.1
8.5
81.1
68.8
-35.4
LYS-9
TRP-10
18.6
18.5
0.5
-3.0
55.0
64.0
-40.8
TRP-10
ARG-11
15.7
15.6
1.9
7.4
13.1
2.4
79.2
ARG-11
PRO-12
16.9
16.7
-0.9
-1.0
122.0
106.9
6.2
PRO-12
GLN-13
16.5
16.2
-7.3
3.5
102.8
103.5
22.2
GLN-13
THR-14
20.0
19.6
8.4
3.5
32.9
52.7
66.5
THR-14
PHE-15
19.4
18.9
-3.5
-8.5
107.8
115.7
-52.2
PHE-15
ALA-16
16.5
16.3
5.3
-5.3
125.3
127.5
-7.8
ALA-16
ASP-17
16.2
15.6
2.4
0.1
143.2
133.4
-16.0
ASP-17
VAL-18
15.0
14.3
-1.6
1.5
101.5
113.1
5.6
VAL-18
VAL-19
12.2
11.9
-9.1
4.8
83.0
83.1
21.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-174
LEU-175
7.1
7.0
9.8
-4.0
18.4
20.5
42.1
LEU-175
LYS-176
7.3
7.0
-3.5
24.1
108.3
106.4
56.4
LYS-176
ALA-177
5.0
4.3
1.5
-3.5
7.3
23.0
-17.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees