Abc-Type Transporter, Periplasmic Subunit Family 3
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-93
ASP-94
4.4
3.6
23.4
-21.5
18.6
18.4
3.9
ASP-94
ALA-95
3.9
2.3
15.2
-69.0
94.9
89.1
-6.3
ALA-95
GLY-96
1.2
1.8
-172.2
-83.1
125.3
154.9
100.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-183
VAL-184
11.6
11.5
-7.6
-1.0
93.8
96.5
-6.7
VAL-184
LEU-185
7.9
7.8
-13.6
-14.9
21.0
28.0
32.0
LEU-185
SER-186
7.2
6.8
12.7
-14.5
114.7
100.3
13.8
SER-186
SER-187
3.5
3.4
6.4
-21.5
54.4
53.8
6.9
SER-187
GLU-188
3.6
0.3
87.1
-57.0
54.3
64.5
28.7
GLU-188
GLN-189
2.4
2.9
18.0
3.3
27.5
38.4
14.9
GLN-189
TYR-190
4.6
4.6
-7.8
9.3
117.8
126.8
11.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees