Maltose Transport System Permease Protein Malf

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-260   TRP-261  20.9 21.4 17.9 -28.1 101.4 95.2 19.4
 TRP-261   LYS-262  17.7 18.0 15.0 12.7 71.7 79.0 101.4
 LYS-262   ASN-263  17.5 18.2 159.8 -124.0 44.6 67.4 43.1
 ASN-263   PHE-264  14.5 15.1 -40.2 33.5 71.6 51.5 -67.1
 PHE-264   THR-265  12.7 12.8 -5.6 15.5 41.2 46.8 -71.2
 THR-265   ARG-266  13.1 14.1 3.7 -11.9 70.7 73.3 -29.6
 ARG-266   VAL-267  13.1 13.8 -6.9 4.5 97.0 90.0 5.9
 VAL-267   PHE-268  9.3 10.0 -10.9 21.2 29.3 24.3 -34.9
 VAL-267   PHE-268  9.3 10.0 -10.9 21.2 29.3 24.3 -34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-267   PHE-268  9.3 10.0 -10.9 21.2 29.3 24.3 -34.9
 VAL-267   PHE-268  9.3 10.0 -10.9 21.2 29.3 24.3 -34.9
 PHE-268   THR-269  9.0 9.7 -42.7 35.6 66.8 72.7 19.1
 THR-269   ASP-270  12.0 12.9 -14.5 18.7 111.0 116.8 8.5
 ASP-270   GLU-271  12.6 13.3 29.7 -10.7 102.5 103.8 -31.8
 GLU-271   GLY-272  12.9 13.2 -136.7 140.9 146.2 146.7 57.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-273   GLN-274  9.7 9.9 -4.6 14.2 125.2 122.1 63.2
 GLN-274   LYS-275  7.8 7.9 -22.5 2.4 99.4 87.7 -0.2
 LYS-275   PRO-276  9.9 9.8 7.3 10.3 108.8 129.5 -18.1
 PRO-276   PHE-277  8.8 8.6 -33.2 5.8 92.3 91.8 0.4
 PRO-276   PHE-277  8.8 8.6 -33.2 5.8 92.3 91.8 0.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-276   PHE-277  8.8 8.6 -33.2 5.8 92.3 91.8 0.4
 PRO-276   PHE-277  8.8 8.6 -33.2 5.8 92.3 91.8 0.4
 PHE-277   LEU-278  5.0 4.9 1.9 -18.5 114.6 116.7 85.4
 LEU-278   ALA-279  5.7 4.9 22.8 -3.5 62.9 71.8 25.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-447   THR-448  10.2 9.9 10.5 10.2 66.0 70.7 114.5
 THR-448   ASN-449  10.3 10.3 -162.7 133.6 119.3 102.0 -113.2
 ASN-449   GLY-450  8.2 7.4 7.6 8.2 13.8 27.8 63.6
 GLY-450   GLY-451  9.5 8.6 -10.5 115.2 89.4 97.4 -40.9
 GLY-451   PRO-452  13.1 12.1 71.9 29.9 66.4 70.8 44.6
 PRO-452   ASP-453  15.6 15.0 -25.2 -18.3 133.3 126.4 -174.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-469   TYR-470  2.1 1.5 -4.3 6.1 112.7 115.3 26.6
 TYR-470   THR-471  4.5 3.8 1.5 -12.2 84.5 90.6 19.7
 THR-471   TYR-472  4.1 4.4 15.0 -13.5 148.7 156.9 11.6
 TYR-472   ARG-473  4.7 4.5 4.4 16.5 103.4 104.5 -27.7
 ARG-473   ILE-474  7.2 6.5 -26.5 34.6 126.2 107.2 40.3
 ILE-474   ALA-475  9.1 9.0 -27.1 20.6 94.9 123.3 13.8
 ILE-474   ALA-475  9.1 9.0 -27.1 20.6 94.9 123.3 13.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-474   ALA-475  9.1 9.0 -27.1 20.6 94.9 123.3 13.8
 ILE-474   ALA-475  9.1 9.0 -27.1 20.6 94.9 123.3 13.8
 ALA-475   PHE-476  9.6 9.7 -5.9 -10.8 156.1 159.8 -44.2
 PHE-476   GLU-477  9.9 9.3 33.6 11.5 73.4 70.3 88.4
 GLU-477   GLY-478  10.6 9.8 -81.5 -130.9 43.0 90.5 -380.8
 GLY-478   GLY-479  13.3 13.4 118.6 -3.7 87.1 115.3 44.3
 GLY-479   GLY-480  16.0 16.2 -103.3 68.5 68.0 28.6 205.2
 GLY-480   GLY-481  17.4 15.6 20.4 -0.2 65.3 118.0 16.5
 GLY-481   GLN-482  16.0 15.5 -54.1 -36.2 73.0 116.0 -55.1
 GLN-482   ASP-483  13.3 13.9 -39.5 -1.3 45.7 61.4 143.9
 ASP-483   PHE-484  13.9 14.2 13.3 -3.1 98.3 86.5 -12.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees