Putative Iron-Uptake Abc Transport System Periplasmic Iron-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-100   ALA-101  11.6 11.7 3.4 -9.0 144.6 144.1 196.6
 ALA-101   ILE-102  8.9 9.0 3.8 0.5 144.7 144.9 -54.3
 ILE-102   THR-103  10.1 10.1 0.1 -0.7 130.4 129.7 -78.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-235   ILE-236  6.5 6.5 -0.7 2.7 124.0 123.9 30.7
 ILE-236   ASN-237  2.8 2.8 -3.8 2.0 61.6 61.3 84.7
 ASN-237   ILE-238  3.3 3.3 -4.1 6.9 117.5 117.3 32.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-292   THR-293  9.5 9.6 -4.0 3.2 155.0 152.6 -74.0
 THR-293   PHE-294  10.7 10.8 -1.2 1.4 134.1 131.5 -13.5
 PHE-294   LYS-295  10.8 10.9 -1.4 2.5 153.2 155.9 36.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees