Succinyl-Coa:3-Ketoacid-Coenzyme A Transferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-87   VAL-88  16.3 16.1 -4.8 5.2 113.9 113.1 -1.0
 VAL-88   SER-89  14.3 14.2 1.1 -1.3 17.4 19.5 5.1
 SER-89   ASN-90  13.5 13.5 -6.5 0.0 108.4 110.6 -9.3
 ASN-90   ASN-91  10.4 10.5 -1.3 4.8 93.3 94.0 -16.4
 ASN-90   ASN-91  10.4 10.5 -1.3 4.8 93.3 94.0 -16.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-90   ASN-91  10.4 10.5 -1.3 4.8 93.3 94.0 -16.4
 ASN-90   ASN-91  10.4 10.5 -1.3 4.8 93.3 94.0 -16.4
 ASN-91   ALA-92  11.1 11.0 1.5 9.4 60.9 58.9 1.7
 ALA-92   GLY-93  14.1 13.7 -5.2 -4.9 51.0 51.6 90.5
 GLY-93   VAL-94  16.0 15.8 -5.9 -3.7 88.0 84.6 -51.5
 VAL-94   ASP-95  17.7 17.4 -0.8 12.4 134.6 130.6 211.0
 ASP-95   ASN-96  20.3 20.0 -8.2 -13.5 87.2 95.5 116.6
 ASN-96   PHE-97  23.1 22.8 32.7 -6.8 119.9 130.3 -258.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-132   VAL-133  10.8 10.7 -2.7 12.3 155.6 157.7 299.0
 VAL-133   GLU-134  8.6 8.6 -9.9 5.0 90.0 87.9 -317.6
 GLU-134   LEU-135  6.2 6.2 0.5 7.8 16.8 16.6 184.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-137   GLN-138  4.7 4.7 -0.4 -0.7 58.0 56.7 -52.6
 GLN-138   GLY-139  6.3 6.4 3.2 -2.0 101.6 100.9 -31.9
 GLY-139   THR-140  8.7 8.9 -3.6 5.5 143.7 146.4 55.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-159   GLY-160  9.7 9.7 -1.9 0.5 22.5 22.3 61.7
 GLY-160   TYR-161  8.0 7.9 -7.4 4.8 53.7 54.2 -44.8
 TYR-161   GLY-162  11.3 11.3 1.0 7.9 95.4 90.3 25.2
 GLY-162   THR-163  11.8 11.5 -13.4 5.4 95.0 91.4 140.8
 THR-163   LEU-164  8.2 8.0 10.9 -0.3 146.6 147.1 -189.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-279   GLU-280  18.1 18.3 -16.3 14.8 48.7 56.5 -49.9
 GLU-280   ARG-281  16.4 16.7 4.9 -3.0 59.6 61.4 82.6
 ARG-281   LEU-282  15.0 15.2 10.7 -14.3 12.6 13.8 -80.3
 ASN-300   VAL-301  21.8 13.5 -33.6 -62.8 59.8 157.8 2644.9
 VAL-301   ARG-302  21.2 14.0 -172.2 -37.6 91.7 127.8 -5203.3
 GLU-303   ARG-304  17.3 17.2 9.8 -10.0 83.7 84.1 -38.0
 ARG-304   ILE-305  18.8 18.8 6.7 -4.2 113.5 117.7 29.3
 ILE-305   ILE-306  16.4 16.5 -5.1 5.6 120.2 122.1 -7.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-312   PHE-313  13.2 13.2 -12.7 8.7 70.5 66.3 113.2
 PHE-313   GLU-314  11.1 10.8 -13.0 11.4 51.2 49.3 8.5
 GLU-314   ASP-315  12.8 12.5 6.2 -6.7 115.7 114.9 -16.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-326   LEU-327  7.7 7.6 14.0 -8.6 40.8 44.9 115.9
 LEU-327   LEU-328  5.4 5.4 3.3 -1.9 33.7 37.9 27.7
 LEU-328   ALA-329  8.4 8.5 -2.5 3.0 125.7 125.0 3.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-332   ILE-333  9.1 8.8 -22.2 29.4 78.7 73.6 65.5
 ILE-333   SER-334  7.4 7.0 14.0 -11.4 168.5 174.2 -82.2
 SER-334   PRO-335  8.4 8.0 7.3 -4.1 106.3 109.1 50.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-336   MET-337  8.3 8.0 15.4 -20.7 146.2 144.8 119.8
 MET-337   THR-338  9.1 8.6 -4.4 2.0 63.8 63.7 119.0
 THR-338   VAL-339  8.2 7.7 0.8 1.6 173.4 169.3 -96.0
 VAL-339   HIS-340  7.2 6.9 2.8 -2.4 113.7 112.9 -22.6
 HIS-340   LEU-341  7.0 6.8 8.1 -6.8 153.5 154.2 -24.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-391   GLY-392  15.8 15.8 4.1 2.5 52.1 48.9 51.5
 GLY-392   HIS-393  14.8 14.7 -7.5 9.9 167.8 167.1 68.5
 HIS-393   VAL-394  14.6 14.4 -6.1 8.2 119.9 123.8 24.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-422   MET-423  4.3 4.0 -2.5 3.7 44.7 43.1 -16.3
 MET-423   GLY-424  1.4 1.2 1.0 3.2 146.7 147.8 -85.7
 GLY-424   GLY-425  2.5 2.4 -0.3 1.6 78.6 80.6 43.8
 GLY-425   ALA-426  2.8 3.0 4.2 -5.9 92.7 91.3 -39.4
 ALA-426   MET-427  3.1 3.1 4.3 -0.8 63.4 62.6 77.2
 MET-427   ASP-428  5.5 5.5 0.2 -2.0 115.9 116.9 32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-434   THR-435  17.1 17.1 -20.4 15.0 122.8 124.6 -88.7
 THR-435   LYS-436  13.8 13.8 2.1 4.3 96.6 94.7 17.1
 LYS-436   VAL-437  14.2 14.1 -2.1 -0.1 75.5 71.6 16.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-463   GLN-464  13.9 13.9 11.9 -10.0 138.9 137.1 -73.5
 GLN-464   CYS-465  16.5 16.7 -3.8 -18.1 40.5 41.7 367.3
 CYS-465   VAL-466  14.0 14.3 23.4 -17.6 148.9 148.6 -207.4
 VAL-466   ASN-467  14.8 14.7 5.6 -1.5 116.2 119.3 -120.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees