Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-32   PRO-33  7.1 5.9 0.3 0.8 158.4 150.0 -9.2
 PRO-33   SER-34  5.4 4.2 3.9 -0.4 106.6 105.2 26.9
 SER-34   GLN-35  7.9 6.9 19.5 -27.3 92.1 78.6 41.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-91   LYS-92  6.4 7.3 -22.5 9.6 103.6 101.6 -40.7
 LYS-92   ARG-93  4.4 5.1 -11.1 5.6 64.5 68.4 1.0
 ARG-93   ILE-94  1.6 2.3 -1.8 -5.5 121.0 120.8 1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  2.3 2.8 0.3 -0.6 50.2 47.5 -7.1
 LYS-105   LEU-106  1.4 0.7 -2.8 7.5 113.2 112.5 29.2
 LEU-106   GLU-107  3.2 3.0 18.9 -17.3 88.8 89.3 22.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-122   VAL-123  5.2 5.9 -9.1 23.5 133.6 128.3 47.8
 VAL-123   ALA-124  4.1 4.7 -36.3 17.4 125.5 134.8 -27.1
 ALA-124   GLY-125  6.3 6.4 14.1 -32.8 75.7 55.1 -8.0
 GLY-125   GLY-126  7.0 7.0 56.7 -32.0 97.6 99.4 10.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  6.7 6.9 -10.0 11.5 78.1 80.0 10.5
 PRO-316   LYS-317  7.3 6.8 7.0 -34.7 113.8 124.1 83.2
 LYS-317   PHE-318  6.7 6.3 -5.1 -61.0 129.1 123.8 -179.3
 ASP-329   TYR-330  24.9 20.3 95.1 -27.4 30.0 33.1 308.2
 TYR-330   GLU-331  23.7 21.8 37.0 -0.4 43.1 79.3 51.8
 GLU-331   GLU-332  25.2 24.9 -66.4 65.6 142.4 126.8 0.2
 GLU-332   GLU-333  25.4 24.0 -24.9 28.2 148.0 140.6 21.9
 GLU-333   GLU-334  24.9 25.2 -15.7 28.3 136.9 110.4 42.0
 GLU-334   ILE-335  25.8 25.9 -39.2 57.9 126.4 147.3 65.5
 ILE-335   ARG-336  23.7 23.3 3.5 -14.6 28.4 48.4 -57.1
 ARG-336   VAL-337  25.3 25.6 52.1 -18.8 42.8 34.0 136.2
 ILE-339   ASN-340  28.0 28.0 34.3 1.5 32.7 25.5 138.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees