Glycogen [Starch] Synthase Isoform 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-201   CYS-202  4.1 4.7 -13.8 22.9 66.8 66.4 3.0
 CYS-202   ALA-203  5.8 6.1 -38.5 14.9 89.0 95.4 -2.2
 ALA-203   SER-204  9.2 9.5 -4.5 7.9 119.5 142.6 -21.5
 SER-204   GLY-205  10.6 10.0 6.1 -26.1 109.3 89.7 6.8
 GLY-205   SER-206  10.7 9.9 18.9 20.9 46.3 26.9 188.7
 SER-206   PHE-207  10.2 8.5 22.9 -98.2 86.6 85.8 32.2
 PHE-207   ASP-208  6.7 7.5 38.3 4.7 130.7 156.2 -187.1
 ASP-208   PHE-209  7.7 8.3 17.3 -8.4 114.2 106.1 8.3
 PHE-209   TYR-210  4.7 4.8 19.8 -12.1 106.5 119.3 -13.0
 TYR-210   ASN-211  6.7 6.6 -25.1 17.6 126.1 111.7 -16.5
 ASN-211   CYS-212  8.9 9.6 16.4 -27.5 36.0 30.8 -37.7
 CYS-212   LEU-213  6.5 7.6 23.8 -4.2 98.8 84.2 -9.6
 LEU-213   GLU-214  4.7 5.0 5.1 5.5 80.2 63.7 24.0
 GLU-214   SER-215  8.3 8.0 -10.6 22.7 165.1 165.7 61.9
 SER-215   VAL-216  7.4 6.8 -10.3 0.1 109.7 107.9 -7.4
 VAL-216   ASP-217  4.6 3.7 -8.6 9.0 106.3 105.8 -19.4
 ASP-217   VAL-218  6.6 5.7 17.3 -9.3 118.0 120.4 16.0
 VAL-218   ASP-219  7.8 7.2 1.6 3.7 64.5 58.6 37.7
 ASP-219   HIS-220  10.3 9.7 -6.0 -28.6 123.8 118.8 -57.0
 HIS-220   GLU-221  7.7 7.6 38.7 -5.6 124.1 119.2 -6.5
 GLU-221   ALA-222  6.1 5.8 -13.3 14.6 61.1 61.2 23.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-274   LYS-275  5.6 6.3 -18.9 7.9 64.7 50.3 23.3
 LYS-275   PHE-276  4.0 3.9 -37.0 13.6 37.1 33.9 94.9
 PHE-276   GLN-277  6.3 6.2 8.9 -16.0 143.3 142.3 32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-595   LEU-596  3.7 3.4 7.2 -7.1 145.1 144.2 23.0
 LEU-596   LEU-597  5.4 5.0 8.9 -17.3 128.5 128.0 16.5
 LEU-597   ASP-598  2.0 1.6 12.2 4.2 66.6 62.5 49.0
 ASP-598   TRP-599  3.0 3.0 -18.1 7.1 71.7 66.6 17.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees