Colicin E3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-157   SER-158  3.7 11.6 116.2 -3.5 45.3 120.1 59.2
 SER-158   LEU-159  3.7 10.8 159.2 -67.2 80.7 134.0 101.2
 LEU-159   PRO-160  7.3 8.0 29.7 -7.7 115.7 120.4 -34.8
 PRO-160   ALA-161  9.1 7.9 139.5 145.3 141.4 61.4 -74.2
 ALA-161   ASP-162  11.0 8.2 -164.2 64.7 102.2 65.9 126.1
 ASP-162   ASP-163  12.2 6.9 176.1 95.1 136.9 80.5 75.6
 ASP-163   ILE-164  15.3 3.3 172.9 -26.7 57.7 25.1 -203.7
 ILE-164   THR-165  18.2 4.0 -110.5 -12.6 119.8 98.8 77.9
 THR-165   GLU-166  19.5 7.4 -30.6 -4.0 115.1 64.6 30.4
 GLU-166   SER-167  22.8 8.9 -161.6 -84.4 143.7 37.7 -20.8
 SER-167   PRO-168  23.2 11.2 168.3 4.9 29.1 106.2 -188.7
 PRO-168   VAL-169  23.9 11.1 157.3 33.2 65.0 59.2 244.4
 VAL-169   SER-170  20.1 13.0 -154.9 46.6 101.6 60.6 -169.9
 SER-170   SER-171  18.2 15.5 -40.8 53.3 97.6 94.9 -13.7
 SER-171   LEU-172  15.0 16.6 -78.4 -6.2 42.8 165.2 84.5
 LEU-172   PRO-173  12.9 17.7 -13.0 19.5 97.5 99.0 11.9
 PRO-173   LEU-174  10.3 21.3 -42.9 108.4 56.7 111.9 27.8
 LEU-174   ASP-175  6.7 22.2 -151.5 -24.0 102.8 165.7 -176.4
 ASP-175   LYS-176  5.0 23.3 25.0 70.6 64.2 52.0 42.4
 LYS-176   ALA-177  1.5 19.9 -6.9 25.1 115.1 120.7 15.5
 ALA-177   THR-178  2.3 18.4 -143.5 -68.5 94.6 93.1 39.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-184   VAL-185  11.8 2.1 -96.6 -45.2 51.1 79.3 -132.7
 VAL-185   VAL-186  15.3 4.6 175.6 30.4 133.3 164.3 157.9
 VAL-186   ASP-187  15.7 4.9 140.4 54.1 74.5 114.4 -100.8
 ASP-187   ASP-188  15.0 7.3 -39.4 -58.9 118.1 52.3 -84.1
 ASP-188   VAL-189  12.9 7.3 40.7 -34.3 12.3 116.3 -6.0
 VAL-189   LYS-190  11.7 9.9 37.1 -71.5 63.7 95.2 -40.9
 LYS-190   ASP-191  12.1 12.3 -58.2 58.8 129.8 52.3 3.3
 ASP-191   GLU-192  9.2 15.7 -81.4 -137.6 95.5 68.9 -22.8
 GLU-192   ARG-193  7.4 15.6 -134.0 -60.2 119.8 133.8 193.4
 ARG-193   GLN-194  5.3 15.1 59.0 -2.3 113.2 64.4 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-203   MET-204  13.5 9.8 -22.6 -12.5 155.8 61.7 -1.1
 MET-204   SER-205  15.6 7.7 54.1 -39.8 101.7 65.7 -0.9
 SER-205   VAL-206  18.1 9.5 19.6 -39.0 24.3 97.9 -16.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-260   GLY-261  2.1 6.3 -128.0 67.8 79.1 114.6 52.0
 GLY-261   THR-262  5.2 4.5 -48.5 -52.7 153.8 88.2 -54.2
 THR-262   GLN-263  5.7 2.4 -107.1 -109.1 88.6 28.0 -95.9
 GLN-263   GLY-264  9.4 2.7 132.3 -141.2 155.0 100.2 0.6
 GLY-264   GLY-265  9.7 3.9 122.6 -54.6 132.7 33.4 19.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees