Smoothened Homolog,soluble Cytochrome B562,smoothened Homolog

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-426   PHE-427  6.9 6.9 -10.7 14.4 16.2 25.1 -13.5
 PHE-427   SER-428  5.6 6.0 -6.9 0.3 61.9 62.7 10.8
 SER-428   ALA-1011  9.2 9.8 -3.2 5.0 66.1 63.0 1.9
 ALA-1011   ARG-1012  10.9 10.7 -5.2 -1.3 44.0 40.9 34.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-1125   SER-1126  16.0 15.8 -12.1 2.8 36.9 38.0 35.3
 SER-1126   THR-1127  18.4 18.1 -1.7 4.2 32.1 28.1 -11.3
 THR-1127   LEU-1128  16.3 16.7 -10.7 -6.5 86.8 82.3 13.6
 LEU-1128   SER-1129  13.1 13.1 6.4 4.2 109.1 93.0 -5.7
 SER-1129   LYS-1130  15.5 14.8 -7.8 6.8 11.1 21.5 2.9
 LYS-1130   ILE-1131  16.0 15.9 13.4 -0.5 121.7 123.3 -55.8
 ILE-1131   ASN-446  12.3 12.3 122.9 -44.6 94.5 89.3 21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees