Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-65
THR-66
10.4
17.7
9.7
-7.4
73.0
119.6
0.7
GLN-67
ARG-68
11.5
20.9
-34.1
30.7
160.8
18.0
-2.8
ARG-68
ASN-69
10.2
18.9
38.3
15.7
55.8
94.1
40.2
ASN-69
CYS-70
13.0
18.8
54.4
4.0
109.9
102.0
-11.3
CYS-70
ASN-71
15.8
21.9
153.5
51.7
90.4
30.2
42.8
ASN-71
LEU-72
18.5
24.6
122.9
-27.1
144.8
61.8
-62.3
LEU-72
THR-73
17.8
23.8
15.7
26.0
144.5
26.1
12.8
THR-73
GLN-74
18.4
25.1
-14.4
10.5
35.5
135.4
-2.2
GLN-74
ILE-75
18.2
23.6
-11.1
-7.4
72.8
110.3
9.9
ILE-75
GLY-76
21.6
24.8
23.9
-155.4
176.5
24.9
-43.5
GLY-76
GLY-77
22.2
25.1
-81.1
-7.8
65.4
83.9
11.0
GLY-77
LEU-78
19.7
23.3
-55.6
-29.5
82.3
155.1
-25.8
LEU-78
ILE-79
17.2
23.7
-6.2
15.4
50.6
85.9
-1.0
ILE-79
ASP-80
19.0
21.4
-13.7
84.4
33.6
96.0
-7.9
ASP-80
SER-81
16.3
24.3
139.5
81.3
86.7
141.4
29.7
SER-81
LYS-82
12.6
26.3
70.4
33.6
104.8
136.2
-31.5
LYS-82
GLY-83
10.3
25.5
133.1
105.3
60.8
137.1
79.8
GLY-83
TYR-84
7.4
25.2
-28.0
-7.8
117.1
85.7
5.2
TYR-84
GLY-85
7.2
21.9
43.9
33.2
122.8
112.8
-59.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-110
LEU-111
9.2
1.0
162.3
0.4
109.2
88.8
-57.3
LEU-111
HIS-112
5.4
2.6
1.8
-20.8
117.6
114.3
6.4
HIS-112
MET-113
6.9
5.1
2.9
-25.3
156.4
168.1
11.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees