DNA Mismatch Repair Protein Mutl

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-467   ARG-468  2.0 1.7 0.1 -4.2 82.8 80.8 0.5
 ARG-468   GLN-469  3.3 3.2 3.8 -0.8 58.6 63.6 30.3
 GLN-469   ALA-470  3.7 3.9 5.6 -2.8 11.2 8.6 16.0
 ALA-470   GLN-471  1.9 2.1 -4.0 4.8 110.0 111.7 -6.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-558   GLN-559  9.6 9.7 13.3 -6.9 45.5 45.5 44.0
 GLN-559   TRP-560  8.5 8.7 -0.1 0.0 160.0 156.4 2.7
 TRP-560   ILE-561  10.5 10.7 3.3 -4.2 71.2 77.2 -29.3
 ILE-561   ALA-562  9.7 9.8 -5.0 7.1 103.2 104.8 1.7
 ALA-562   ARG-563  5.9 5.9 10.6 -3.2 28.5 20.8 51.4
 ARG-563   ASN-564  6.0 6.3 35.7 -13.1 32.2 44.0 175.9
 ASN-564   LEU-565  8.3 8.3 45.0 15.7 80.5 90.6 167.7
 SER-567   GLU-568  8.8 4.9 9.4 22.5 65.1 103.4 -76.2
 GLU-568   HIS-569  6.4 6.8 115.8 21.7 97.8 48.2 412.9
 HIS-569   ALA-570  7.1 8.6 94.3 -89.7 31.8 23.3 59.8
 ALA-570   GLN-571  9.0 7.9 98.1 -62.3 101.8 78.8 -9.3
 GLN-571   TRP-572  10.9 10.7 -24.3 7.6 18.3 21.5 115.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees