Transcriptional Regulator (Ntrc Family)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  CYS-158   ALA-159  4.7 5.3 -2.7 -9.1 86.6 87.9 75.5  ALA-159   GLU-160  5.9 5.4 28.4 -25.1 83.9 71.5 83.2  GLU-160   CYS-161  6.1 5.4 17.6 1.2 41.5 44.6 164.4  CYS-161   PRO-162  8.6 8.1 -38.6 30.5 145.3 153.8 -44.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  VAL-163   LEU-164  5.9 5.8 2.9 -9.2 157.6 155.2 43.3  LEU-164   ILE-165  6.5 6.5 11.2 -15.5 118.8 120.9 61.1  ILE-165   THR-166  3.3 3.7 14.1 -13.8 168.4 167.3 -10.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLY-170   VAL-171  6.1 5.6 -1.9 -5.5 67.0 70.7 172.2  VAL-171   GLY-172  5.1 5.3 32.0 -34.8 161.3 164.6 55.6  GLY-172   LYS-173  5.8 5.7 47.3 -23.1 132.8 130.3 -179.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-180   HIS-181  3.1 2.8 10.0 -9.1 37.9 37.7 45.2  HIS-181   LYS-182  4.1 4.0 -6.3 5.3 129.0 127.5 -18.2  LYS-182   LEU-183  7.2 6.9 7.9 -12.4 54.2 53.2 -58.5  LEU-183   SER-184  6.2 5.8 7.2 -2.7 53.2 55.1 90.6  SER-184   ASP-185  2.8 2.4 -33.8 28.2 156.2 154.8 -47.4 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ARG-186   SER-187  4.6 4.5 19.1 -10.4 59.7 51.2 -3.3  SER-187   LYS-188  6.7 6.7 -11.0 5.4 75.1 75.9 30.4  LYS-188   GLU-189  9.5 9.6 26.3 -28.3 79.0 86.5 -14.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ARG-274   ILE-275  7.2 7.2 -10.5 3.0 15.4 12.1 98.9  ILE-275   LEU-276  8.0 7.8 -1.4 3.4 53.0 54.9 -9.9  LEU-276   ALA-277  5.4 5.2 -10.5 -7.0 29.6 30.4 169.3  ALA-277   ALA-278  6.6 6.5 7.4 -30.8 43.7 45.5 -193.9  ALA-277   ALA-278  6.6 6.5 7.4 -30.8 43.7 45.5 -193.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-277   ALA-278  6.6 6.5 7.4 -30.8 43.7 45.5 -193.9  ALA-277   ALA-278  6.6 6.5 7.4 -30.8 43.7 45.5 -193.9  ALA-278   THR-279  4.8 4.9 2.9 8.1 32.9 28.9 121.5  THR-279   ASN-280  5.7 5.7 14.6 11.1 48.5 46.3 254.5 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ILE-307   PRO-308  5.6 5.7 -13.9 9.3 13.0 12.8 28.4  PRO-308   PRO-309  7.8 7.8 20.3 -13.1 120.4 119.1 -9.8  PRO-309   LEU-310  7.2 6.9 21.3 -15.2 92.2 87.0 75.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees