Gtp:amp Phosphotransferase Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-123   THR-124  3.4 2.2 -24.9 45.1 108.0 104.5 11.1
 THR-124   ALA-125  5.4 2.1 -39.7 -34.2 47.0 59.8 49.1
 ALA-125   ARG-126  4.8 4.2 48.7 -8.1 75.9 94.8 1.2
 ARG-126   TRP-127  6.0 5.9 3.7 5.1 58.4 57.5 -0.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-157   GLN-158  13.1 12.8 9.6 4.1 82.8 84.8 -9.2
 GLN-158   ARG-159  9.4 9.1 -6.6 1.7 25.6 32.8 10.7
 ARG-159   GLU-160  7.4 7.8 -11.5 -10.5 69.9 46.5 17.1
 GLU-160   ASP-161  6.2 6.4 7.9 -24.7 66.5 89.9 -2.0
 ASP-161   ASP-162  3.0 3.8 37.4 -5.8 20.5 30.8 24.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees