Endoplasmic Reticulum Aminopeptidase 1,Endoplasmic Reticulum Aminopeptidase 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-650   LYS-651  7.0 6.8 2.9 -13.2 96.4 105.4 11.7
 LYS-651   LEU-652  7.8 7.4 15.3 -0.4 59.9 58.8 55.1
 LEU-652   SER-653  5.3 5.2 -4.7 6.1 97.2 98.2 18.7
 SER-653   ILE-654  1.6 1.9 -15.7 5.7 166.1 164.2 -50.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-658   ASP-659  1.4 2.9 -3.5 6.4 76.7 76.5 -12.6
 ASP-659   LEU-660  5.2 6.6 -5.7 9.2 56.5 54.7 -20.0
 LEU-660   SER-661  6.2 7.0 -14.1 5.7 19.8 19.9 35.0
 SER-661   LEU-662  3.9 4.6 -3.8 10.3 54.1 57.5 -11.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-676   LEU-677  5.3 4.4 9.0 -7.7 78.7 75.6 2.6
 LEU-677   ASN-678  6.0 4.9 -4.0 11.1 56.4 56.2 -26.4
 ASN-678   GLU-679  9.3 8.3 -9.9 -4.9 16.3 24.2 61.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees