Intact Lactose Operon Repressor With Gratuitous Inducer Iptg

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-331   PRO-332  8.5 8.1 -30.0 23.8 67.5 71.0 4.8
 PRO-332   ASN-333  6.0 6.1 -4.8 149.1 64.8 69.2 -45.3
 ASN-333   THR-334  3.3 3.3 137.6 -40.9 65.7 120.7 30.0
 THR-334   GLN-335  1.6 1.8 -9.9 -139.5 113.0 94.0 87.0
 GLN-335   THR-336  2.5 1.8 175.6 155.2 141.0 131.3 6.6
 THR-336   ALA-337  5.3 3.6 175.4 160.0 150.7 150.7 8.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees