Ecorv Endonuclease

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-7   ILE-8  9.7 9.6 2.6 -0.7 75.1 67.7 -3.3
 ILE-8   ASN-9  6.2 6.0 1.5 -7.7 91.1 93.8 -15.0
 TYR-18   ASP-19  6.7 10.7 112.1 -17.6 43.2 45.0 457.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-41   THR-42  6.7 8.0 -53.6 75.2 94.8 96.1 -5.9
 THR-42   ILE-43  10.0 10.6 -17.7 7.6 123.7 120.1 -84.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-137   TYR-138  4.1 4.1 9.7 1.9 72.1 70.0 66.8
 TYR-138   THR-139  3.4 2.8 -28.8 21.4 128.2 126.5 -55.9
 THR-139   ARG-140  6.1 5.7 4.6 -2.9 28.3 30.7 52.0
 ARG-140   VAL-141  5.2 4.8 32.7 -50.3 72.8 70.1 -41.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-162   TYR-163  5.0 4.8 18.5 -14.2 45.0 51.8 26.7
 TYR-163   LYS-164  4.1 4.1 30.0 -7.6 42.8 51.7 101.9
 LYS-164   GLY-165  6.4 6.3 4.0 -24.5 41.3 38.9 -97.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees