N-Methyl-D-Aspartate Receptor Subunit 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-144
GLY-145
7.8
7.8
-8.3
-0.7
42.9
40.2
32.0
GLY-145
LEU-146
4.8
5.0
-19.4
28.7
106.6
111.6
15.5
LEU-146
THR-147
2.2
2.5
3.3
1.9
65.1
63.1
26.3
THR-147
ILE-148
4.5
4.9
-0.5
5.6
105.3
109.1
11.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-238
VAL-239
8.1
8.2
9.3
-14.6
69.1
73.3
-12.3
VAL-239
THR-240
8.4
8.3
-7.2
15.2
166.2
169.8
49.8
THR-240
THR-241
7.6
7.7
-7.2
-65.7
116.0
109.0
-196.8
THR-241
GLY-242
10.2
10.7
130.7
-6.0
74.6
13.3
517.8
GLY-242
GLU-243
10.7
11.9
-64.6
-21.5
133.1
108.1
-269.7
GLU-243
LEU-244
10.7
11.4
0.6
7.4
61.4
70.8
-4.7
LEU-244
PHE-245
7.6
8.1
3.0
-32.6
20.5
6.1
-154.2
PHE-245
PHE-246
7.2
6.6
154.0
-142.6
47.3
80.8
41.9
PHE-246
ARG-247
5.2
4.3
-81.8
46.4
56.6
49.4
129.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees