Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-169   LYS-170  2.6 3.4 50.2 2.6 157.4 143.2 -354.4
 LYS-170   TYR-171  3.6 5.9 38.4 -17.7 100.8 101.1 -59.9
 TYR-171   LEU-172  7.1 7.7 16.1 -20.3 104.4 132.4 12.4
 LEU-172   PHE-173  7.0 6.0 20.6 13.9 158.0 155.9 -251.3
 PHE-173   ASP-174  5.2 5.1 -9.7 -11.5 40.1 64.6 118.3
 ASP-174   ASN-175  5.0 8.9 80.3 0.4 98.8 86.9 75.9
 ASN-175   ARG-176  8.8 10.2 -156.3 28.0 86.9 30.4 477.4
 ARG-176   TYR-177  10.2 13.0 53.8 -28.9 135.2 127.5 -160.8
 TYR-177   GLY-178  9.7 11.0 27.7 -23.0 151.4 105.1 -56.3
 GLY-178   THR-179  7.0 7.7 -28.9 -9.5 49.6 42.5 176.5
 THR-179   GLY-180  9.0 8.8 -14.5 16.6 79.9 64.4 30.5
 GLY-180   GLN-181  11.9 12.3 -6.7 -0.8 38.6 31.0 63.8
 GLN-181   SER-182  11.2 11.9 20.6 -10.6 146.8 139.3 -91.7
 SER-182   THR-183  8.7 8.8 -1.3 0.1 63.5 60.2 5.6
 THR-183   TRP-184  11.6 11.4 -5.1 6.8 55.1 51.8 -27.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-335   GLY-336  3.1 3.3 -10.6 5.5 28.6 27.4 14.5
 GLY-336   HIS-337  3.7 4.0 60.0 -68.8 128.7 142.9 95.7
 HIS-337   PRO-338  3.6 3.7 -9.3 2.5 102.1 97.1 33.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees