Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-88   ILE-89  6.9 6.1 -61.3 41.2 73.2 79.0 73.0
 ILE-89   ARG-90  4.5 3.8 -1.1 -9.4 117.4 116.8 -28.5
 ARG-90   THR-91  7.5 7.1 -8.5 11.1 81.5 74.7 54.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-176   VAL-177  7.5 7.0 1.3 20.1 102.0 119.3 -44.0
 VAL-177   ASN-178  4.0 3.6 14.3 -7.9 90.1 93.5 57.7
 ASN-178   LEU-179  1.6 0.9 -14.8 22.2 89.2 88.3 11.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-182   ASP-183  8.1 8.4 172.7 -153.1 149.5 126.3 -130.8
 ASP-183   VAL-184  9.1 8.9 23.4 21.1 131.7 131.9 -99.2
 VAL-184   ASP-185  5.9 6.3 -10.1 -14.0 38.8 34.1 127.5
 ASP-185   LEU-186  6.7 7.2 -67.1 50.4 107.9 122.3 1.3
 ASP-185   LEU-186  6.7 7.2 -67.1 50.4 107.9 122.3 1.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-185   LEU-186  6.7 7.2 -67.1 50.4 107.9 122.3 1.3
 ASP-185   LEU-186  6.7 7.2 -67.1 50.4 107.9 122.3 1.3
 LEU-186   PRO-187  6.7 5.6 5.2 -6.4 76.5 86.4 10.6
 PRO-187   ALA-188  9.8 8.9 7.0 -7.1 131.7 130.6 -15.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees