Glycine Betaine/carnitine/choline-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-115   THR-116  3.2 3.2 6.3 1.8 23.7 24.0 145.0
 THR-116   TYR-117  3.1 3.0 0.7 -2.2 70.6 71.5 13.5
 TYR-117   ALA-118  3.6 3.7 0.6 -5.5 63.9 62.2 -77.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-149   ASN-150  13.3 13.3 7.1 -12.6 113.0 111.1 18.4
 ASN-150   TYR-151  16.6 16.6 3.7 0.3 107.6 105.7 9.0
 TYR-151   TRP-152  15.7 15.7 -5.3 -1.4 32.8 34.6 84.1
 TRP-152   MET-153  12.8 12.9 3.7 -3.1 158.8 161.5 71.7
 MET-153   LYS-154  14.7 14.6 4.7 17.6 72.8 76.3 109.3
 MET-153   LYS-154  14.7 14.6 4.7 17.6 72.8 76.3 109.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-153   LYS-154  14.7 14.6 4.7 17.6 72.8 76.3 109.3
 MET-153   LYS-154  14.7 14.6 4.7 17.6 72.8 76.3 109.3
 LYS-154   LEU-155  17.2 17.4 -5.6 -6.1 75.1 89.0 -264.1
 LEU-155   LYS-156  15.5 16.0 1.5 9.3 38.9 29.9 273.4
 LYS-156   GLY-157  16.4 17.3 -3.1 -36.2 97.7 99.5 14.6
 GLY-157   ASN-158  14.2 15.2 -177.4 -156.5 115.3 71.6 -214.8
 ASN-158   GLY-159  10.6 11.4 -25.3 -1.1 79.5 73.0 39.9
 GLY-159   TYR-160  11.5 11.6 11.5 -4.8 33.1 35.5 176.6
 TYR-160   GLN-161  11.2 11.2 -2.9 2.4 153.7 155.6 7.3
 GLN-161   ASP-162  13.0 12.9 1.3 5.1 69.9 71.3 47.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-219   PRO-220  9.3 9.3 0.5 3.4 32.9 30.8 -32.1
 PRO-220   TYR-221  9.1 9.0 5.1 -4.1 51.8 54.3 191.9
 TYR-221   ASP-222  8.0 8.0 3.9 -7.6 22.9 19.6 -126.6
 ASP-222   CYS-223  9.3 9.2 2.4 1.4 50.0 51.9 103.1
 CYS-223   SER-224  9.2 9.0 -3.6 0.9 139.6 136.5 10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-248   ILE-249  10.4 10.1 1.4 -1.4 74.3 74.7 32.1
 ILE-249   ASP-250  6.9 6.8 4.5 0.0 12.4 14.8 -4.1
 ASP-250   THR-251  7.5 7.4 1.2 3.8 65.9 66.9 20.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-252   THR-253  7.0 6.8 2.4 4.2 31.4 30.6 98.2
 THR-253   MET-254  5.4 5.2 -6.1 3.4 79.2 80.6 78.3
 MET-254   GLN-255  1.8 1.7 1.1 -2.2 109.2 109.9 -116.6
 GLN-255   GLU-256  4.1 4.1 -1.2 0.7 40.0 40.4 -62.0
 GLN-255   GLU-256  4.1 4.1 -1.2 0.7 40.0 40.4 -62.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-255   GLU-256  4.1 4.1 -1.2 0.7 40.0 40.4 -62.0
 GLN-255   GLU-256  4.1 4.1 -1.2 0.7 40.0 40.4 -62.0
 GLU-256   LEU-257  6.1 6.1 -0.5 2.3 56.0 55.4 39.7
 LEU-257   ASN-258  3.8 3.8 -3.0 -3.1 117.4 117.5 -64.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-264   LEU-265  13.2 13.3 -3.6 0.3 116.0 118.1 -70.9
 LEU-265   LYS-266  13.9 13.9 -5.3 8.0 148.7 151.2 48.2
 LYS-266   GLU-267  11.4 11.4 -3.6 4.1 79.0 79.1 62.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees