Ovotransferrin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-420   CYS-421  4.8 4.1 -147.8 123.7 131.4 112.8 -65.6
 PRO-428   ALA-429  2.8 3.4 64.2 -74.8 90.0 79.2 -22.5
 ALA-429   SER-430  1.0 1.9 5.0 -86.2 36.3 10.2 -220.4
 SER-430   TYR-431  3.5 1.8 113.8 -43.9 52.6 82.5 44.8
 TYR-431   PHE-432  4.3 4.6 67.3 -19.5 20.1 38.1 130.1
 PHE-432   ALA-433  5.4 5.8 -33.7 10.4 141.6 142.2 -51.7
 ALA-433   VAL-434  6.2 6.3 -39.6 39.4 100.7 109.1 9.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-470   ILE-471  5.1 3.9 16.1 -37.6 167.5 159.7 61.1
 ILE-471   HIS-472  5.1 4.3 14.0 1.2 129.0 127.5 -28.6
 HIS-472   ASN-473  3.3 2.2 -61.8 50.5 97.2 96.2 29.4
 ASN-473   ARG-474  7.0 5.6 -61.8 76.7 49.4 62.1 -7.7
 ARG-474   THR-475  7.6 7.7 -24.2 36.0 41.1 7.3 -35.1
 THR-475   GLY-476  4.4 6.2 -106.1 118.3 75.5 60.5 19.6
 GLY-476   THR-477  4.4 5.0 103.1 -44.7 102.5 118.8 -50.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-588   VAL-589  3.1 3.4 13.6 -25.0 89.8 100.3 3.6
 VAL-589   PRO-590  0.8 0.5 24.9 25.3 28.9 42.1 125.6
 PRO-590   THR-591  3.4 3.6 -7.7 -5.9 90.1 94.5 -2.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees