Glycogen Synthase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-209   ALA-210  4.4 4.7 4.2 -4.7 95.2 95.8 28.2
 ALA-210   VAL-211  1.7 2.0 -3.0 -11.3 22.7 24.8 78.9
 VAL-211   SER-212  1.7 1.9 4.2 1.6 99.9 104.3 -55.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-219   THR-220  4.9 4.9 2.6 -9.2 155.1 153.9 35.1
 THR-220   GLU-221  3.4 3.6 16.1 -21.1 126.6 124.9 21.2
 GLU-221   PRO-222  7.1 7.3 -2.2 6.2 83.7 83.4 26.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-244   LEU-245  3.4 3.4 -12.6 2.8 54.0 54.4 74.1
 LEU-245   ASN-246  2.6 2.3 -3.1 13.9 44.3 38.4 -125.6
 ASN-246   GLY-247  0.5 0.7 -17.1 10.7 25.2 32.3 151.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-460   SER-461  5.6 4.7 48.8 -21.0 66.1 67.0 88.9
 SER-461   TRP-462  3.7 4.1 -37.3 -0.3 49.4 52.9 138.5
 TRP-462   GLN-463  4.0 4.1 -8.0 -11.6 84.2 84.7 37.4
 GLN-463   VAL-464  7.5 7.7 2.8 0.0 146.8 131.4 10.2
 VAL-464   ALA-465  7.5 8.2 4.9 0.0 142.8 152.8 -26.4
 ALA-465   ALA-466  5.7 6.0 1.1 -7.6 92.3 101.1 16.4
 ALA-466   LYS-467  8.8 8.8 26.4 -13.9 120.5 115.0 -43.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees